Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1545 ATGTACGTCATGGGAAGGCCACCTTGCTGCGACAAAATTGGGATCAAGAAGGGCCCTTGGACTCCCGAAGAAGACATCATCCTCGTCTCTTACATTCAAGAGCACGGACCTGGTTTGATGAGATGCAGCAAGAGTTGCAGACTCCGATGGACCAACTATCTTCGTCCCGGTATTAAAAGAGGCAACTTCACTGATCACGAGGAAAAAATGATCATCCATCTCCAAGCTCTGCTCGGCAACAGATGGGCTGCTATAGCTTCGTATCTTCCACAGAGGACGGACAATGACATCAAGAATTATTGGAACACCCATTTGAAGAAGAAGCTGAAAAGGCTCCACACTGGGACTGAGGGTGACGACCAAGAAGACGACTCGTTCTCGCAGCCCAAGGGCCAGTGGGAGAGAAGGCTTCAAACAGATATCCACATGGCCAAACAGGCTCTTTGCGAGGCTCTGTCTCTGGACAAGCCGATGACCGAAACCGATACCAAGCCCTCCGATTCCACGATCCAAACATCCCCTTATGCCTCAAGCACCGAAAACATAGCCCGATTGCTCCAGAACTGGATGAACCAATCCCCGAAGGACCCGACTCAACAAACAAGTTCACCGCCAGGAGCTCGCTTCATCAACACCGCCACGGCGGGTTCCAGTTCGTCCAGCGAAGCTGCGACGTATAATAGCAACAATAACAACCACGTTCTGGATTCTCTATGGAGCTTCAGCTCTAATGCTTCCCAACAATCCGTGTCTGCGGATGACAACACCACGAACAATAGCTTGTTCCAGGACGAAAGCAAGCTTAGCTCGGAGTCGCAGCTTCCTCTGACTCTGATCGAGAAGTGGCTTTTCGATGATGCGGTGGCTCAGAACCAGGAAGACCTAATCAATGAGTCGCTTCTGGAAGAAACTACTCCGCAGTTGTACTTCTAG 933 0.507 MYVMGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKRLHTGTEGDDQEDDSFSQPKGQWERRLQTDIHMAKQALCEALSLDKPMTETDTKPSDSTIQTSPYASSTENIARLLQNWMNQSPKDPTQQTSSPPGARFINTATAGSSSSSEAATYNSNNNNHVLDSLWSFSSNASQQSVSADDNTTNNSLFQDESKLSSESQLPLTLIEKWLFDDAVAQNQEDLINESLLEETTPQLYF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1545 310 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 237 - -
Prci9g1545 310 MobiDBLite consensus disorder prediction 153 176 - -
Prci9g1545 310 Gene3D - 16 59 - -
Prci9g1545 310 Gene3D - 61 131 - -
Prci9g1545 310 MobiDBLite consensus disorder prediction 192 228 - -
Prci9g1545 310 SMART sant 16 56 IPR001005 -
Prci9g1545 310 SMART sant 59 107 IPR001005 -
Prci9g1545 310 MobiDBLite consensus disorder prediction 248 267 - -
Prci9g1545 310 MobiDBLite consensus disorder prediction 112 133 - -
Prci9g1545 310 CDD SANT 62 105 IPR001005 -
Prci9g1545 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Prci9g1545 310 Pfam Myb-like DNA-binding domain 17 54 IPR001005 -
Prci9g1545 310 Pfam Myb-like DNA-binding domain 60 105 IPR001005 -
Prci9g1545 310 SUPERFAMILY Homeodomain-like 14 101 IPR009057 -
Prci9g1545 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 54 IPR017930 -
Prci9g1545 310 ProSiteProfiles Myb-like domain profile. 12 105 IPR001005 -
Prci9g1545 310 FunFam Transcription factor MYB30 61 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1545 Prci-Chr9 28220098 28221718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1545 4 286 MYB Transcription Factor Family AT5G62470 48.844 1.53e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci9g1545 Myb_DNA-binding 6.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1545 K09422 - qsu:111987893 371.318