Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1544 ATGAAGAAGAGACAGGTGGTCGTGAAGAGGGATGTGGCCAAGACGTCGTCGTCGGTGATGAGGAACGTCAGATATTTGGAGTGTCAGAAGAATCACGCGGCCAACATAGGAGGCTACGCCGTGGATGGTTGCAGAGAGTTCATGGCCAGTGGTGATGACGTCACTGCCGGAGCTCTTACCTGTGCTGCTTGTGGCTGTCACAGGAATTTCCACAGAAGAGAAGTTCAGACCGAGGTTGTCTGGCAAGCCTATCTATTACATGAAGGAAGCAATGATGACTACCAAATAAGCAGAACTTGA 300 0.5033 MKKRQVVVKRDVAKTSSSVMRNVRYLECQKNHAANIGGYAVDGCREFMASGDDVTAGALTCAACGCHRNFHRREVQTEVVWQAYLLHEGSNDDYQISRT 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1544 99 Pfam ZF-HD protein dimerisation region 22 75 IPR006456 -
Prci9g1544 99 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 5 78 - -
Prci9g1544 99 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 24 75 IPR006456 -
Prci9g1544 99 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 25 74 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1544 Prci-Chr9 28207021 28210537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1544 1 82 Zinc finger-homeobox gene family AT1G18835 75.904 4.79e-37 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci9g1544 ZF-HD_dimer 1.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1544 - - pcin:129319329 162.155