Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1542 ATGGGGAGTCAGAGTCAGAGTCAGCAACTCATGGGATGGAATTTTAAGAATGATTTCGACCAAGTTCCATTCCCTAAGAATGAATTCGGCGAAGTTCCTTTCTCTCCCACGTACCAAATACCTTCATCTGACTTCAGCGCAAATGACAGCGGATGTTTAGGACTGGATTGGCCTTATGGATTAGCCGTACCTTGCACGGGACCGGATCCTTTATTCGAAGAAACCCTAGCCATTGAACCAACACAAAGCGTGCAAGACTATGACTTTTACGACCTCGATATTAAGAAGGGACTAGCAGTGTGGAATGAGATTGACGATGGGTTTGATTCAGATAACCCTGTTTATGTACTCTGCAAGAAAGGAGAAAGTGGGAAGGAAGTGGAGGAGGAAGAAAGCGAGGTGAAGCGAACAGGCAGAGAAGAGAGAAGTGGCAGCACCAAGTTGTTGTCAAGGAAGGCTATTTCTCAGTACTTCTATATGCCCATAACACAGGCTGCCAAGGAGCTTAATGTGGGCCTAACACTTCTGAAGAAGAGGTGCAGAGAATTGGGAATAAGAAGGTGGCCTCACAGGAAACTGATGAGCCTGCAAACTTTGATAAACAATGTGAAGGAGCTAGGAAAAGAAGGGGACCGAGACAGTGAAGAGAAACTGAGGAACGCGCTTGAGATACTGGCTAAGGAAAAGAAGTTGATGGAGGAGATGCCGGATTTGCAGCTTGAGGATAACACAAAAAGGCTCAGACAGGCTTGTTTCAAAGCCAACTACAAGAAAAGGAAGCTCATGGGATCTTCAGCGGAATTGGAGTCTGCAAGGAATGGAAATAATTATGACGATCAAGTACAGGACATCAAGCATCTGTTGCCACCAGTCCCTCTCCATTTTACAACATAA 894 0.4541 MGSQSQSQQLMGWNFKNDFDQVPFPKNEFGEVPFSPTYQIPSSDFSANDSGCLGLDWPYGLAVPCTGPDPLFEETLAIEPTQSVQDYDFYDLDIKKGLAVWNEIDDGFDSDNPVYVLCKKGESGKEVEEEESEVKRTGREERSGSTKLLSRKAISQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVKELGKEGDRDSEEKLRNALEILAKEKKLMEEMPDLQLEDNTKRLRQACFKANYKKRKLMGSSAELESARNGNNYDDQVQDIKHLLPPVPLHFTT 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1542 297 ProSiteProfiles RWP-RK domain profile. 130 216 IPR003035 -
Prci9g1542 297 Coils Coil 215 235 - -
Prci9g1542 297 Pfam RWP-RK domain 149 196 IPR003035 -
Prci9g1542 297 PANTHER PROTEIN RKD4 126 276 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1542 Prci-Chr9 28193359 28194640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1542 136 266 AtRKD Transcription Factor Family AT1G18790 67.164 7.80e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Prci9g1542 RWP-RK 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1542 - - pcin:129319730 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1542 9 28193359 28194640 Prci9g1542 9 28193359 28194640 ECH