Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1527 ATGGAAAACGTTTCAGGACTCTGTAAGGAACAAGACAAAATGAATTTGCCTCCTGGGTTTCGGTTTCACCCTACTGATGAAGAGCTTATAAGTCATTACCTGTACAAGAAGGTCACTGATTCCAACTTCTCAGCCAGGGCCATTGGGGATGTCGACTTGAACAGGTCCGAGCCTTGGGATTTGCCATGGAAAGCCAAAATGGGAGAAAAAGAGTGGTACTTCTTTTGCGTGAGAGATCGCAAATACCCGACTGGTTTGAGAACCAACAGGGCTACTGAAACAGGATACTGGAAAGCCACCGGGAAAGATAAAGAGATTTACAGAGGCAAATCGCTGGTCGGGATGAAGAAAACTCTGGTTTTCTACAGAGGAAGGGCACCCAAAGGAGAGAAAACCAACTGGGTGATGCACGAATACAGATTAGAGGGTAAATTCTCTGTCCACAACCTCCCTAAAACCGCAAAGGTTGAGTGGGTGATATGCAGGGTTTTTCAAAAAGGTTCGAGCGGTAAGAAAACCCATATATCTGGGATGATGAGGCTGGATTCTCTGGGAAATGAATTGGGTTCTTCTGGTTTACCTCCATTGACAGATTCGTCACCTTTCCCTGGCAAACCCGTCACAGAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATCAATGCTCCGAGAAACAACCAAGGAGGTATCTTTGATTCCTACAGCGACGTCCCTAATTATGGGGTTTCTTCGAATCCCTCGGACAACCTTCCCAGGATCCCACCTTCCGGTTCATTATATTCCTCTCAGCCACATCAAGCTCCTTCAAGTTTAGCTTTACCCAGCTCTATCTATGGCCTGCAAGACCAGACCATCCTCAGAGCCTTGCTCGAAAACCAGGAATCAAACAGGAACAATTTCAAACCCGGGAGGGAGATGCTCAGTGTATCGCAAGAAACAGGTCTTACCACCGACATGAACCCCGAAATCTCCTCGGTCGTGTCAAGTCTTGATATGGCTCGGAGACCCGTTAACAATCAGCAGCAGCAGCTGCCAAATGCTTTATCTGCAGGAATGGACTATGAGACCTTGTGGACTTACTGA 1083 0.4728 MENVSGLCKEQDKMNLPPGFRFHPTDEELISHYLYKKVTDSNFSARAIGDVDLNRSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATETGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLEGKFSVHNLPKTAKVEWVICRVFQKGSSGKKTHISGMMRLDSLGNELGSSGLPPLTDSSPFPGKPVTESAYVPCFSNPINAPRNNQGGIFDSYSDVPNYGVSSNPSDNLPRIPPSGSLYSSQPHQAPSSLALPSSIYGLQDQTILRALLENQESNRNNFKPGREMLSVSQETGLTTDMNPEISSVVSSLDMARRPVNNQQQQLPNALSAGMDYETLWTY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1527 360 FunFam NAC domain-containing protein 100-like 25 170 - -
Prci9g1527 360 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Prci9g1527 360 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
Prci9g1527 360 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Prci9g1527 360 MobiDBLite consensus disorder prediction 241 267 - -
Prci9g1527 360 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Prci9g1527 360 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1527 Prci-Chr9 28142217 28144182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1527 14 360 NAC Transcription Factor Family AT5G07680 58.501 2.40e-130 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci9g1527 NAM 1.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1527 - - qsa:O6P43_022865 545.043