Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1517 ATGGAGACTGAAGAAATTAATTTGAACAAAGAATCTATTGTTGGTGCTGGAAATAATAGCAAGAATGGTGATGGATTCATTGATAGAAGCAAAGTTAGGATTTTGTTATGTGACAACGATGCCAAGAGTTCGGAAGAAGTGTTTACGCTTCTCTTGAAGTGCTCATATCAGGTTACTTCCGTAAGGTCTGCAAGACAGGTCATTGATGCATTGAACGCAGAGGGGCAAGATATTGACATCATACTCGCTGAAGTTGATCTCCCTATGAAGAAGGGTTTGAAGATGTTGAAGTATATTGCACGAGACAAGGAACTGTGCCGAATCCCTGTTATAATGATGTCGGCACAAGATGAGGTATCCGTCGTTGTTAAGTGCCTAAAACTCGGAGCAGCAGACTATCTAGTAAAGCCTTTACGGACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTGAACTATGACTTCGACCTGGTTGTATCAGATCCTAGTGACGCTAATACAAACAGTACCACCCTGTTCTCAGATGATACAGATGACAAGTCCAAGAGAAGCACTAATCCTGAGATAGGAATGCCTATCCAACAGGAACATGAGTCAATTGTAGCTGTTGCCTCTGCTGCTGCAGTTGTTGAGGGGCCTCCAAATGCTCAAGCATCAGAATATCGTCCTGAAGTGCCTGGAATCAGTGATCGCCGAACTGGACATTTTTCAGTTGGTCCCAAGAGGAGTGAACTTAAGATTGGGGAGTCATCAGCCTTCTTCACTTATGTCAAAGCAGCCACAATGAAGAGTAACTTCCAACCAGTTATTCATGTTGACCATAATGCTGCTACACATTTGAGCATGGAAGATGCACATCAAGCTTGCACTCAACAGGGGGTTAATGATCTTCAAATACATGAAAATGGAGAGACATGTGAAGGCCATTCACAGGATGACTTACCCAGCAGTAATAGCATCCCAGATTCTTTCTCCATTGAAAGGTCTTCTACTCCTCCTGCGTCAATGGAAAATTCACATCAAAAACACTTAATGGAAGAATCTTTACCTCAGGGCATGATCCATCCAAGAAATGGAACTCATAATTCTGAACTTGAAGTATCTGGCATGCCTGGCCAACATCATTATCCATATTATATTTCAGGGGTTGTTAATCCCATAATGATGCCGTCATCAGCACAATTGTACCAAAAGAATCTCCAGGACCTGCAAGCCCATGCTGGTCCAGCTATCATTGCACAATACAATCATCTTTCGCAATGCCCTCCTCATACAACTGGGATGACGTCCTTCCCATATTACCCAATGGGTATATGCTTACAACCTGGACAGGTGTCTACTGTTCATTCATGGCCATCATTTGGTAGTTCAACTTCATCTGAAGTCAAAATAAGTAAAGTTGATAGAAGAGAAGCGGCATTGATGAAGTTTAGACAGAAAAGGAAAGAACGCTGCTTTGATAAGAAAATTAGGTACGTCAATAGGAAACGACTTGCTGAAAGACGGCCACGGGTAAGAGGACAGTTTGTCAGAAAGTTGAATGGTGTAAATGTTGATCTTAATGGCCAACCCGCTTCCACTGACTATGATGAGGATGATGAAGAAGATGAAGAGGATCATGCAGCGCGAGATTCCTCGCCTGATGATGCGTGA 1695 0.426 METEEINLNKESIVGAGNNSKNGDGFIDRSKVRILLCDNDAKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGQDIDIILAEVDLPMKKGLKMLKYIARDKELCRIPVIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILNYDFDLVVSDPSDANTNSTTLFSDDTDDKSKRSTNPEIGMPIQQEHESIVAVASAAAVVEGPPNAQASEYRPEVPGISDRRTGHFSVGPKRSELKIGESSAFFTYVKAATMKSNFQPVIHVDHNAATHLSMEDAHQACTQQGVNDLQIHENGETCEGHSQDDLPSSNSIPDSFSIERSSTPPASMENSHQKHLMEESLPQGMIHPRNGTHNSELEVSGMPGQHHYPYYISGVVNPIMMPSSAQLYQKNLQDLQAHAGPAIIAQYNHLSQCPPHTTGMTSFPYYPMGICLQPGQVSTVHSWPSFGSSTSSEVKISKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPASTDYDEDDEEDEEDHAARDSSPDDA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1517 564 ProSiteProfiles CCT domain profile. 484 526 IPR010402 GO:0005515
Prci9g1517 564 MobiDBLite consensus disorder prediction 318 356 - -
Prci9g1517 564 MobiDBLite consensus disorder prediction 540 556 - -
Prci9g1517 564 MobiDBLite consensus disorder prediction 228 253 - -
Prci9g1517 564 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Prci9g1517 564 MobiDBLite consensus disorder prediction 529 564 - -
Prci9g1517 564 SMART REC_2 32 147 IPR001789 GO:0000160
Prci9g1517 564 SUPERFAMILY CheY-like 28 158 IPR011006 -
Prci9g1517 564 Gene3D - 32 233 - -
Prci9g1517 564 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Prci9g1517 564 MobiDBLite consensus disorder prediction 180 207 - -
Prci9g1517 564 MobiDBLite consensus disorder prediction 239 253 - -
Prci9g1517 564 Pfam CCT motif 484 526 IPR010402 GO:0005515
Prci9g1517 564 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 242 IPR045279 GO:0009736
Prci9g1517 564 MobiDBLite consensus disorder prediction 323 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1517 Prci-Chr9 28058909 28064647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1517 21 563 Response Regulator Gene Family AT5G61380 50.955 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Prci9g1517 Response_reg 1.1e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1517 K12127 - gmx:100271889 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1517 9 28058909 28064647 Prci9g1517 9 28058909 28064647 ECH