Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1516 ATGGAGACTGAAGAAATTAATTTGAACAAAGAATCTATTGTTGGTGCTGGAAATAATAGCAAGAATGGTGATGGATTCATTGATAGAAGCAAAGTTAGGATTTTGTTATGTGACAACGATGCCAAGAGTTCGGAAGAAGTGTTTACGCTTCTCTTGAAGTGCTCATATCAGGTTACTTCCGTAAGGTCTGCAAGACAGGTCATTGATGCATTGAACGCAGAGGGGCAAGATATTGACATCATACTCGCTGAAGTTGATCTCCCTATGAAGAAGGGTTTGAAGATGTTGAAGTATATTGCACGAGACAAGGAACTGTGCCGAATCCCTGTTATAATGATGTCGGCACAAGATGAGGTATCCGTCGTTGTTAAGTGCCTAAAACTCGGAGCAGCAGACTATCTAGTAAAGCCTTTACGGACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGTCAATTGTAGCTGTTGCCTCTGCTGCTGCAGTTGTTGAGGGGCCTCCAAATGCTCAAGCATCAGAATATCGTCCTGAAGTGCCTGGAATCAGTGATCGCCGAACTGGACATTTTTCAGTTGGTCCCAAGAGGAGTGAACTTAAGATTGGGGAGTCATCAGCCTTCTTCACTTATGTCAAAGCAGCCACAATGAAGAGTAACTTCCAACCAGTTATTCATGTTGACCATAATGCTGCTACACATTTGAGCATGGAAGATGCACATCAAGCTTGCACTCAACAGGGGGTTAATGATCTTCAAATACATGAAAATGGAGAGACATGTGAAGGCCATTCACAGGATGACTTACCCAGCAGTAATAGCATCCCAGATTCTTTCTCCATTGAAAGGTCTTCTACTCCTCCTGCGTCAATGGAAAATTCACATCAAAAACACTTAATGGAAGAATCTTTACCTCAGGGCATGATCCATCCAAGAAATGGAACTCATAATTCTGAACTTGAAGTATCTGGCATGCCTGGCCAACATCATTATCCATATTATATTTCAGGGGTTGTTAATCCCATAATGATGCCGTCATCAGCACAATTGTACCAAAAGAATCTCCAGGACCTGCAAGCCCATGCTGGTCCAGCTATCATTGCACAATACAATCATCTTTCGCAATGCCCTCCTCATACAACTGGGATGACGTCCTTCCCATATTACCCAATGGGTATATGCTTACAACCTGGACAGGTGTCTACTGTTCATTCATGGCCATCATTTGGTAGTTCAACTTCATCTGAAGTCAAAATAAGTAAAGTTGATAGAAGAGAAGCGGCATTGATGAAGTTTAGACAGAAAAGGAAAGAACGCTGCTTTGATAAGAAAATTAGGTACGTCAATAGGAAACGACTTGCTGAAAGACGGCCACGGGTAAGAGGACAGTTTGTCAGAAAGTTGAATGGTGTAAATGTTGATCTTAATGGCCAACCCGCTTCCACTGACTATGATGAGGATGATGAAGAAGATGAAGAGGATCATGCAGCGCGAGATTCCTCGCCTGATGATGCGTGA 1527 0.4257 METEEINLNKESIVGAGNNSKNGDGFIDRSKVRILLCDNDAKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGQDIDIILAEVDLPMKKGLKMLKYIARDKELCRIPVIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMSIVAVASAAAVVEGPPNAQASEYRPEVPGISDRRTGHFSVGPKRSELKIGESSAFFTYVKAATMKSNFQPVIHVDHNAATHLSMEDAHQACTQQGVNDLQIHENGETCEGHSQDDLPSSNSIPDSFSIERSSTPPASMENSHQKHLMEESLPQGMIHPRNGTHNSELEVSGMPGQHHYPYYISGVVNPIMMPSSAQLYQKNLQDLQAHAGPAIIAQYNHLSQCPPHTTGMTSFPYYPMGICLQPGQVSTVHSWPSFGSSTSSEVKISKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPASTDYDEDDEEDEEDHAARDSSPDDA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1516 508 MobiDBLite consensus disorder prediction 267 296 - -
Prci9g1516 508 Gene3D - 32 255 - -
Prci9g1516 508 MobiDBLite consensus disorder prediction 484 500 - -
Prci9g1516 508 MobiDBLite consensus disorder prediction 473 508 - -
Prci9g1516 508 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Prci9g1516 508 MobiDBLite consensus disorder prediction 173 194 - -
Prci9g1516 508 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Prci9g1516 508 SUPERFAMILY CheY-like 28 157 IPR011006 -
Prci9g1516 508 SMART REC_2 32 147 IPR001789 GO:0000160
Prci9g1516 508 ProSiteProfiles CCT domain profile. 428 470 IPR010402 GO:0005515
Prci9g1516 508 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 270 IPR045279 GO:0009736
Prci9g1516 508 Pfam CCT motif 428 470 IPR010402 GO:0005515
Prci9g1516 508 MobiDBLite consensus disorder prediction 262 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1516 Prci-Chr9 28058909 28064650 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1516 194 507 Response Regulator Gene Family AT5G61380 40.945 3.60e-69 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Prci9g1516 Response_reg 8.8e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1516 K12127 - qsa:O6P43_022870 680.633