Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1502 ATGGGTTGTGTCAATTCGAGGCAGACGGTGTCGGTGACGCCGGCGGTCGATCACTCCGATCTGTTTCCGGGCAATGCGAGCTTGGGACATTCGGAAAGGAGCTTGGGGGACTTGGATGGTAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAGTCAGTGGGCGAGTCTGACAGAGAGAGTTCAAAATGGGTATGTGATGAGTCTTTGAGTTTCAGATTGGGGAATCTGCAAAAGTATGTGGAGGGAGAGCAAGTCGCAGCCGGTTGGCCTGCGTGGCTTACTGCCGTCGCCAGCGAAGCCATTCACGGTTGGGTCCCCCTCCGAGCTGATGCGTTTGAGAAGCTCGAGAAGATTGGGCAGGGTACATACAGCAGTGTGTTCCGAGCGAAGGAACTTGAGACAGGGAAGATAGTAGCACTGAAGAAGGTGCGGTTTGACATTTTTGAACCGGAAAGTGTGAGGTTTATGGCACGAGAAATAATGATTCTGAGAAGGCTTGATCATCCAAACATCATAAAATTGGAGGGTTTGATTACTTCCAAATTGTCATCTAGCATATACCTTGTATTCGAGTACATGGAACATGATATCACAGGGCTCCTGTCCAGTCCTGATATCAAATTTAGTGAATCACAGATTAAGTGCTACATGAAACAGCTGTTGTCTGGACTTGATCATTGTCATTCACGTGGTGTAATGCATCGAGATATCAAAGGATCAAATCTTCTGGTGAACAATGAAGGGATACTAAAGGTTGCTGATTTTGGATTGGCAAAATTCTCTGTTTCTGGGAACAAGCAGCCCCTCACCAGTCGTGTTGTCACTTTGTGGTACCGTCCTCCTGAACTTTTGCTGGGCTCAACAGATTATGGTCCTTCTGTAGATCTATGGAGCATTGGCTGTGTATTTGCAGAACTTCTAGTTAGAAAACCAATTCTTCAGGGGAGAACAGAGGTGGAGCAATTGCACAAAATTTTCAAACTTTGTGGCTCCCCACCTGATGAATACTGGAAAAAGACCAAGCTTCCTCATGCAACTTTGTTCAGGCCGCAGCAGACATACAATAGTTGCCTCCAAGAGACCTTTAAAGATTTTCCTGTGACCACTGTGAATCTTCTGCAAACCCTTCTTTCCATAGAATCATACAAGCGTGGCACTGCTTCATGTGCTCTTTCATCAGAGTATTTCAAGACAAAGCCATATGCATGTGATCCATCAAGCTTGCCTGTATACTCGCCTAGCAAGGAGATTGATGCAAAACTCTGGGAGGAGTCAAGAAGAAAAAAGATTGGTAGAAGAGCTCGTGGACCTGAAACAAGAAAACCATCAAGAAAGCCACCAGGATTCAGTAAATTAGCCCCAGCGGAGAGTTTGGTTAATCAAACTCGAAATTCTCAAGCAGTCAAATGTAGAACTTCCTGCATCCTCAAAGAGAACACCAACACAGATGAGGAGGCGCCAAAGCCATCGACTGATAAAGCAGAAGATGCTTCCCATATTAAAAATGCATCTCACGGAGATATTCCCATGTTACAAGTTTCAACATCAAGTGGCTTTGCATGGGCAAAAAGACGAAAAGACGATGCTTCAAGACGATCTCATTGTCGATCTATTTCACGGGGGCATATTTTGAATTCCTCAGAACATTCTTCACTACATTCAAGAAACAACTTTGACTCCAGAAACCAGGAAAACAAGGAATTTTGTGGCGGACGCTCCAACTCAAAGGGCCATGACATGCGTGAAATCTCTAAGCTTGCAATGTTGAACCAGTGGAGCAAGTTTGATCGCCCAGACTCATTTGATGCTTCTGATGAATACCACTCACAAGAGCTATCTGTCGCCCTTTATCATAGAGAATATTCAGCATCCAGGAGAAGTAAAATGGATTCTGGAGAGAAGGTGGAATTTTCAGGACCCCTGCTATCTCAAATGCATGCGGTTGACGAGCTCTTAGAAAGACATGAGCGTCAAATTCGCCGTACGGTGCGAAGATCTTGGTTTCAGAAAGGTAAGAAGCATGAGAAGAAATTGGAAGACTAA 2043 0.4479 MGCVNSRQTVSVTPAVDHSDLFPGNASLGHSERSLGDLDGKKKKKKKKKSESVGESDRESSKWVCDESLSFRLGNLQKYVEGEQVAAGWPAWLTAVASEAIHGWVPLRADAFEKLEKIGQGTYSSVFRAKELETGKIVALKKVRFDIFEPESVRFMAREIMILRRLDHPNIIKLEGLITSKLSSSIYLVFEYMEHDITGLLSSPDIKFSESQIKCYMKQLLSGLDHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLAKFSVSGNKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSIGCVFAELLVRKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTKLPHATLFRPQQTYNSCLQETFKDFPVTTVNLLQTLLSIESYKRGTASCALSSEYFKTKPYACDPSSLPVYSPSKEIDAKLWEESRRKKIGRRARGPETRKPSRKPPGFSKLAPAESLVNQTRNSQAVKCRTSCILKENTNTDEEAPKPSTDKAEDASHIKNASHGDIPMLQVSTSSGFAWAKRRKDDASRRSHCRSISRGHILNSSEHSSLHSRNNFDSRNQENKEFCGGRSNSKGHDMREISKLAMLNQWSKFDRPDSFDASDEYHSQELSVALYHREYSASRRSKMDSGEKVEFSGPLLSQMHAVDELLERHERQIRRTVRRSWFQKGKKHEKKLED 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1502 680 CDD STKc_CDK9_like 112 396 - -
Prci9g1502 680 SMART serkin_6 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1502 680 FunFam probable serine/threonine-protein kinase At1g54610 99 194 - -
Prci9g1502 680 MobiDBLite consensus disorder prediction 540 558 - -
Prci9g1502 680 MobiDBLite consensus disorder prediction 428 452 - -
Prci9g1502 680 Gene3D Phosphorylase Kinase; domain 1 99 194 - -
Prci9g1502 680 MobiDBLite consensus disorder prediction 540 579 - -
Prci9g1502 680 FunFam probable serine/threonine-protein kinase At1g54610 195 435 - -
Prci9g1502 680 Gene3D Transferase(Phosphotransferase) domain 1 195 435 - -
Prci9g1502 680 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1502 680 MobiDBLite consensus disorder prediction 15 57 - -
Prci9g1502 680 MobiDBLite consensus disorder prediction 428 445 - -
Prci9g1502 680 Pfam Protein kinase domain 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1502 680 MobiDBLite consensus disorder prediction 481 504 - -
Prci9g1502 680 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Prci9g1502 680 SUPERFAMILY Protein kinase-like (PK-like) 105 403 IPR011009 -
Prci9g1502 680 PANTHER CELL DIVISION PROTEIN KINASE 110 400 - -
Prci9g1502 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Prci9g1502 680 MobiDBLite consensus disorder prediction 559 579 - -
Prci9g1502 680 MobiDBLite consensus disorder prediction 481 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1502 Prci-Chr9 28013011 28018751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1502 104 428 Core Cell Cycle Gene Families AT5G10270 49.853 7.33e-109 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci9g1502 Pkinase 5.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1502 - - gmx:100803328 1033.86