Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1498 ATGTCACAGCATGTAACAGATTCCTGGGGCTTACTATTGATCTGTTTCGCAATCATTTTCTCTGCAGGTAAAATAGTTGCCGGAGATTCTTTGGACACAGACAGAGAAGTTTTGCTCCAGCTCAAATCGTATCTCAACAATCAAACTCTAGTAGACCAAGGACGTTACACTAACTGGAACACGAGCAGTTCGAATCCTTGTGAATGGTCGGGAATCTCGTGCAGCGGCAATGGAACAACGAGGAGGGTGGTCGGAGTCGACCTCTCCGGCAACAAAATCACTGGCCAGATATTCCAGAACTTCTCTCAGCTCACTCAACTCACGCACCTTGACCTCTCCCGGAACACACTCTCCGGCAAGATTCCGGCGGACTTGAGGCGGTGCCACAAGCTCGTGTATCTTAATCTCTCGTACAATATTCTTCCCGAAGAGTTGAATTTGATTGGCTTGACGAACTTACAAACTCTGGACCTATCAGGCAACAGGCTTCACGGGGATCTTGGGTCTCATTTCCCTGCCATTTGTGACAATCTGATCAGTTTGAATATCTCAGGGAATAGCTTCACTGGTAGGGTTGATGAGTGCTTCGATCAGTGCCTGAAATTGCAGTATTTGGATTTGAGCACTAATAAGCTGAGTGGGGGCATATGGATGGGAATTGCGAAGCTGAGAATGTTTTCTGTTTCAGAGAATGTTCTCAGTGGGACAATCCCTCCATCAGCTTTTCCAGTGAAGTGCAATCTTGAAGTACTTGACATTTCAGAAAATATGTTCACAGGGAATGTCCCGCAGGAGCTCGCTAACTGCAAGAATTTAACGATCCTGAATCTTTCCAGCAACAAATTCAACGGATCAATACCTAAACAAGTTGGTTCCATTTCTGGGATTGAAGCATTGTACTTGGGGAACAACAATTTCTCAAGAGACATCCCAGAAGAACTTTTGAACCTGACCAATTTAGCATTCTTGGATTTAACTAGAAATCAATTTGGTGGGAACATACAAGAGATATTTGGGAAATTCAAGCAGGTGAAGTATCTTCTGTTACACTCAAATAATTACACTGGAGGATTATCTTCATCAGGAACTCTCAAGTTGCCAAATATTTTACGCTTGGACCTAAGCTGCAACAACTTCTCAGGTCCATTACCCACAGAAATCTCTCAAATGTCAAGCTTGAAGTTATTAATGTTAGCCTACAATCAATTCACAGGACCTATTCCACTTGAATTTGGAAACTTGCCTCGCCTTCAAGCTCTTGACCTATCTTTCAACAACTTATCTGGGCCAATCCCACCAACTCTTGGAAAGTTAACCTCTCTTTTATGGCTCATGCTTGCGAATAATTCATTAACAGGTGAAATCCCAAGAGAGCTGGGAAACTGTTCGAGCTTATTATGGATAAACCTTGCGAATAATAAGCTCACGGGAAAATTCCCACCTGAATTGGCCAATATAGGAAGAAACGCCATGGCCACATTTGAATCAAATAGGCAATATGAGACGGTCAGTGCTGGCTCTGGTGAGTGCTTAGCCATGAAAAGATGGATACCTGCAGATTACCCTCCATTTAGTTTTGTGTATGACATCCTTACGAGGAAGAATTGCAGAAGCATTTGGGACAGATTGCTCAAAGGGTATGGGATTTTCCCCATTTGCAATGCAGGGACATTTTCACCATTATCTCAAATCTCTGGCTATGTCCAGCTAAGTGGGAACCAACTCTCAGGTGAAGTTCCTCCAGAAATTGGGACGATGCAGAACCTGAGCATGTTGCATTTGGGGCTTAACAGATTTTCTGGGAAACTTCCTGCAGAGGTGAAAAGTTTGCGGCTTGTGGTATTGAACATAACAAGAAACGAGTTTTCTGGGGAAATCCCTTGGGAAATTGGGACCATGAAGTGTTTACAGAATCTCGATCTCTCCTACAATAATTTTTCTGGGGTTTTCCCCTCAAGTCTCAACAACTTGTCAGAGCTCAGCAAGTTCAACATTTCTTATAATCCCTTGATATCAGGTGAGATTCCATCTGCAGGACAACTAGCTACATTCGAGAAATACTCGTACTTGGGGAATCCCCTCTTGCATCTTCCAAGCTTCATTGACAACACCACCAATGATCAGAAAAACACGACCTCCCACAACAGAGCCCTCAAAAAATCCATAAATCTCTCTGTTATCTTGGTGTTCTTTGCTCTCACTCTGGCTTTCTTAATATTTGGTCTCCTTACTGTCATCGTTTGTCTACTGATAAAAACCCCATCAGAAGAACCACTCCTGACAGTCTCAAAACTCGACCATGAGTCTGGAACCTCATCCCCATGGTTGTCGGATATAGTTAAGGTTATTCGATTGGATAGGACAGCTTTTACACACGCCGACATCTTGAAAGCCACAGGGAATTTCTCAGACAATAGAATCATAGGCAAAGGAGGCTTCGGAACAGTGTACAGAGGAATATTTTCAGATGGGAGAGAAGTGGCAGTGAAAAAACTCCAAAGAGAAGGACTTGAAGGCGAAAAAGAATTCAGAGCAGAAATGGAGGTTCTTAGTGGCCATCGCTTCGGTTGGCCCCACCCAAACCTCGTCACACTCTACGGTTGGTGCCTTGACGGCTCAGAAAAAATACTGGTTTATGAATACATTTCAGGTGGAAGCTTGGAAGATCTCGTGACTGACAGAACGAAATTCACATGGAAAAGACGGCTAGAAGTAGCCATTGACGTTGCTCAAGCTTTGGTTTACTTACACCATGAGTGCTACCCTTCAATCGTTCACAGAGATGTGAAGGCCAGCAATGTGTTATTGGACAACAAAACAGGGAAGGCCAAAGTCACGGACTTTGGACTAGCCAGAGTGGTTGATGTCGGAGGTAGCCACGTCAGCACAATGGTAGCTGGGACAGTGGGGTACGTGGCACCGGAATACGGCCACACATGGAAGGCGACGACGAAGGGTGACGTCTACAGTTATGGAGTGTTGGCTATGGAGTTGGCGACGGGAAGAAGAGCATTAGACGGAGGGGAGGAATGTTTGGTGGAATGGGGAAGGAGGGTGATAGGTCAGGGAAGAAATAGGCCAATCGGCCGGCCGGTGATTCCAGTGGTACTGATGGGTTCTGGTTTGCTTGAAGGGATGGAGGAGATGATGAAGCTATTGAAGATAGGGGTGAGGTGCACGGTGGAGACACCGCAGGCTAGGCCTACGATGAAGGAGGTTCTGGATATGTTGATTAAGGTGTATAATCCCAAGAGCGATTCAAGCTATGAACATCTGAGTCATTGGTGA 3288 0.4486 MSQHVTDSWGLLLICFAIIFSAGKIVAGDSLDTDREVLLQLKSYLNNQTLVDQGRYTNWNTSSSNPCEWSGISCSGNGTTRRVVGVDLSGNKITGQIFQNFSQLTQLTHLDLSRNTLSGKIPADLRRCHKLVYLNLSYNILPEELNLIGLTNLQTLDLSGNRLHGDLGSHFPAICDNLISLNISGNSFTGRVDECFDQCLKLQYLDLSTNKLSGGIWMGIAKLRMFSVSENVLSGTIPPSAFPVKCNLEVLDISENMFTGNVPQELANCKNLTILNLSSNKFNGSIPKQVGSISGIEALYLGNNNFSRDIPEELLNLTNLAFLDLTRNQFGGNIQEIFGKFKQVKYLLLHSNNYTGGLSSSGTLKLPNILRLDLSCNNFSGPLPTEISQMSSLKLLMLAYNQFTGPIPLEFGNLPRLQALDLSFNNLSGPIPPTLGKLTSLLWLMLANNSLTGEIPRELGNCSSLLWINLANNKLTGKFPPELANIGRNAMATFESNRQYETVSAGSGECLAMKRWIPADYPPFSFVYDILTRKNCRSIWDRLLKGYGIFPICNAGTFSPLSQISGYVQLSGNQLSGEVPPEIGTMQNLSMLHLGLNRFSGKLPAEVKSLRLVVLNITRNEFSGEIPWEIGTMKCLQNLDLSYNNFSGVFPSSLNNLSELSKFNISYNPLISGEIPSAGQLATFEKYSYLGNPLLHLPSFIDNTTNDQKNTTSHNRALKKSINLSVILVFFALTLAFLIFGLLTVIVCLLIKTPSEEPLLTVSKLDHESGTSSPWLSDIVKVIRLDRTAFTHADILKATGNFSDNRIIGKGGFGTVYRGIFSDGREVAVKKLQREGLEGEKEFRAEMEVLSGHRFGWPHPNLVTLYGWCLDGSEKILVYEYISGGSLEDLVTDRTKFTWKRRLEVAIDVAQALVYLHHECYPSIVHRDVKASNVLLDNKTGKAKVTDFGLARVVDVGGSHVSTMVAGTVGYVAPEYGHTWKATTKGDVYSYGVLAMELATGRRALDGGEECLVEWGRRVIGQGRNRPIGRPVIPVVLMGSGLLEGMEEMMKLLKIGVRCTVETPQARPTMKEVLDMLIKVYNPKSDSSYEHLSHW 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1498 1095 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Prci9g1498 1095 Gene3D Ribonuclease Inhibitor 555 713 IPR032675 -
Prci9g1498 1095 SMART serkin_6 802 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1498 1095 Gene3D Ribonuclease Inhibitor 30 173 IPR032675 -
Prci9g1498 1095 FunFam Putative LRR receptor-like serine/threonine-protein kinase 341 502 - -
Prci9g1498 1095 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 882 1085 - -
Prci9g1498 1095 Gene3D Phosphorylase Kinase; domain 1 771 881 - -
Prci9g1498 1095 Pfam Leucine rich repeat 370 427 IPR001611 GO:0005515
Prci9g1498 1095 Pfam Leucine rich repeat 151 212 IPR001611 GO:0005515
Prci9g1498 1095 Pfam Leucine rich repeat 86 139 IPR001611 GO:0005515
Prci9g1498 1095 PRINTS Leucine-rich repeat signature 107 120 - -
Prci9g1498 1095 PRINTS Leucine-rich repeat signature 150 163 - -
Prci9g1498 1095 Gene3D Ribonuclease Inhibitor 337 430 IPR032675 -
Prci9g1498 1095 Gene3D Ribonuclease Inhibitor 242 336 IPR032675 -
Prci9g1498 1095 SUPERFAMILY L domain-like 568 698 - -
Prci9g1498 1095 FunFam Leucine-rich repeat receptor protein kinase MSP1 765 881 - -
Prci9g1498 1095 ProSiteProfiles Protein kinase domain profile. 802 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1498 1095 SUPERFAMILY L domain-like 222 481 - -
Prci9g1498 1095 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 246 1079 - -
Prci9g1498 1095 FunFam Putative LRR receptor-like serine/threonine-protein kinase 561 708 - -
Prci9g1498 1095 SUPERFAMILY Protein kinase-like (PK-like) 786 1078 IPR011009 -
Prci9g1498 1095 Gene3D Ribonuclease Inhibitor 431 491 IPR032675 -
Prci9g1498 1095 SMART LRR_typ_2 150 177 IPR003591 -
Prci9g1498 1095 SMART LRR_typ_2 293 317 IPR003591 -
Prci9g1498 1095 SMART LRR_typ_2 414 437 IPR003591 -
Prci9g1498 1095 SMART LRR_typ_2 633 656 IPR003591 -
Prci9g1498 1095 SMART LRR_typ_2 438 462 IPR003591 -
Prci9g1498 1095 SMART LRR_typ_2 104 128 IPR003591 -
Prci9g1498 1095 SMART LRR_typ_2 366 390 IPR003591 -
Prci9g1498 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 924 936 IPR008271 GO:0004672|GO:0006468
Prci9g1498 1095 Gene3D Ribonuclease Inhibitor 174 241 IPR032675 -
Prci9g1498 1095 SUPERFAMILY RNI-like 67 287 - -
Prci9g1498 1095 Pfam Protein kinase domain 803 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1498 1095 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 239 334 - -
Prci9g1498 1095 CDD STKc_IRAK 808 1079 - -
Prci9g1498 1095 ProSitePatterns Protein kinases ATP-binding region signature. 808 831 IPR017441 GO:0005524
Prci9g1498 1095 Gene3D Transferase(Phosphotransferase) domain 1 882 1092 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1498 Prci-Chr9 27983363 27987495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1498 58 1093 Receptor kinase-like Gene Family AT1G55610 32.286 7.10e-152 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Prci9g1498 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1498 - - gmx:100783886 1570.44