Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1497 ATGTCACAGCATGTAACAGATTCCTGGGGCTTACTATTGATCTGTTTCGCAATCATTTTCTCTGGTAAAATAGTTGCCGGAGATTCTTTGGACACAGACAGAGAAGTTTTGCTCCAGCTCAAATCGTATCTCAACAATCAAACTCTAGTAGACCAAGGACGTTACACTAACTGGAACACGAGCAGTTCGAATCCTTGTGAATGGTCGGGAATCTCGTGCAGCGGCAATGGAACAACGAGGAGGGTGGTCGGAGTCGACCTCTCCGGCAACAAAATCACTGGCCAGATATTCCAGAACTTCTCTCAGCTCACTCAACTCACGCACCTTGACCTCTCCCGGAACACACTCTCCGGCAAGATTCCGGCGGACTTGAGGCGGTGCCACAAGCTCGTGTATCTTAATCTCTCGTACAATATTCTTCCCGAAGAGTTGAATTTGATTGGCTTGACGAACTTACAAACTCTGGACCTATCAGGCAACAGGCTTCACGGGGATCTTGGGTCTCATTTCCCTGCCATTTGTGACAATCTGATCAGTTTGAATATCTCAGGGAATAGCTTCACTGGTAGGGTTGATGAGTGCTTCGATCAGTGCCTGAAATTGCAGTATTTGGATTTGAGCACTAATAAGCTGAGTGGGGGCATATGGATGGGAATTGCGAAGCTGAGAATGTTTTCTGTTTCAGAGAATGTTCTCAGTGGGACAATCCCTCCATCAGCTTTTCCAGTGAAGTGCAATCTTGAAGTACTTGACATTTCAGAAAATATGTTCACAGGGAATGTCCCGCAGGAGCTCGCTAACTGCAAGAATTTAACGATCCTGAATCTTTCCAGCAACAAATTCAACGGATCAATACCTAAACAAGTTGGTTCCATTTCTGGGATTGAAGCATTGTACTTGGGGAACAACAATTTCTCAAGAGACATCCCAGAAGAACTTTTGAACCTGACCAATTTAGCATTCTTGGATTTAACTAGAAATCAATTTGGTGGGAACATACAAGAGATATTTGGGAAATTCAAGCAGGTGAAGTATCTTCTGTTACACTCAAATAATTACACTGGAGGATTATCTTCATCAGGAACTCTCAAGTTGCCAAATATTTTACGCTTGGACCTAAGCTGCAACAACTTCTCAGGTCCATTACCCACAGAAATCTCTCAAATGTCAAGCTTGAAGTTATTAATGTTAGCCTACAATCAATTCACAGGACCTATTCCACTTGAATTTGGAAACTTGCCTCGCCTTCAAGCTCTTGACCTATCTTTCAACAACTTATCTGGGCCAATCCCACCAACTCTTGGAAAGTTAACCTCTCTTTTATGGCTCATGCTTGCGAATAATTCATTAACAGGTGAAATCCCAAGAGAGCTGGGAAACTGTTCGAGCTTATTATGGATAAACCTTGCGAATAATAAGCTCACGGGAAAATTCCCACCTGAATTGGCCAATATAGGAAGAAACGCCATGGCCACATTTGAATCAAATAGGCAATATGAGACGGTCAGTGCTGGCTCTGGTGAGTGCTTAGCCATGAAAAGATGGATACCTGCAGATTACCCTCCATTTAGTTTTGTGTATGACATCCTTACGAGGAAGAATTGCAGAAGCATTTGGGACAGATTGCTCAAAGGGTATGGGATTTTCCCCATTTGCAATGCAGGGACATTTTCACCATTATCTCAAATCTCTGGCTATGTCCAGCTAAGTGGGAACCAACTCTCAGGTGAAGTTCCTCCAGAAATTGGGACGATGCAGAACCTGAGCATGTTGCATTTGGGGCTTAACAGATTTTCTGGGAAACTTCCTGCAGAGGTGAAAAGTTTGCGGCTTGTGGTATTGAACATAACAAGAAACGAGTTTTCTGGGGAAATCCCTTGGGAAATTGGGACCATGAAGTGTTTACAGAATCTCGATCTCTCCTACAATAATTTTTCTGGGGTTTTCCCCTCAAGTCTCAACAACTTGTCAGAGCTCAGCAAGTTCAACATTTCTTATAATCCCTTGATATCAGGTGAGATTCCATCTGCAGGACAACTAGCTACATTCGAGAAATACTCGTACTTGGGGAATCCCCTCTTGCATCTTCCAAGCTTCATTGACAACACCACCAATGATCAGAAAAACACGACCTCCCACAACAGAGCCCTCAAAAAATCCATAAATCTCTCTGTTATCTTGGTGTTCTTTGCTCTCACTCTGGCTTTCTTAATATTTGGTCTCCTTACTGTCATCGTTTGTCTACTGATAAAAACCCCATCAGAAGAACCACTCCTGACAGTCTCAAAACTCGACCATGAGTCTGGAACCTCATCCCCATGGTTGTCGGATATAGTTAAGGTTATTCGATTGGATAGGACAGCTTTTACACACGCCGACATCTTGAAAGCCACAGGGAATTTCTCAGACAATAGAATCATAGGCAAAGGAGGCTTCGGAACAGTGTACAGAGGAATATTTTCAGATGGGAGAGAAGTGGCAGTGAAAAAACTCCAAAGAGAAGGACTTGAAGGCGAAAAAGAATTCAGAGCAGAAATGGAGGTTCTTAGTGGCCATCGCTTCGGTTGGCCCCACCCAAACCTCGTCACACTCTACGGTTGGTGCCTTGACGGCTCAGAAAAAATACTGGTTTATGAATACATTTCAGGTGGAAGCTTGGAAGATCTCGTGACTGACAGAACGAAATTCACATGGAAAAGACGGCTAGAAGTAGCCATTGACGTTGCTCAAGCTTTGGTTTACTTACACCATGAGTGCTACCCTTCAATCGTTCACAGAGATGTGAAGGCCAGCAATGTGTTATTGGACAACAAAACAGGGAAGGCCAAAGTCACGGACTTTGGACTAGCCAGAGTGGTTGATGTCGGAGGTAGCCACGTCAGCACAATGGTAGCTGGGACAGTGGGGTACGTGGCACCGGAATACGGCCACACATGGAAGGCGACGACGAAGGGTGACGTCTACAGTTATGGAGTGTTGGCTATGGAGTTGGCGACGGGAAGAAGAGCATTAGACGGAGGGGAGGAATGTTTGGTGGAATGGGGAAGGAGGGTGATAGGTCAGGGAAGAAATAGGCCAATCGGCCGGCCGGTGATTCCAGTGGTACTGATGGGTTCTGGTTTGCTTGAAGGGATGGAGGAGATGATGAAGCTATTGAAGATAGGGGTGAGGTGCACGGTGGAGACACCGCAGGCTAGGCCTACGATGAAGGAGGTTCTGGATATGTTGATTAAGGTGTATAATCCCAAGAGCGATTCAAGCTATGAACATCTGAGTCATTGGTGA 3285 0.4484 MSQHVTDSWGLLLICFAIIFSGKIVAGDSLDTDREVLLQLKSYLNNQTLVDQGRYTNWNTSSSNPCEWSGISCSGNGTTRRVVGVDLSGNKITGQIFQNFSQLTQLTHLDLSRNTLSGKIPADLRRCHKLVYLNLSYNILPEELNLIGLTNLQTLDLSGNRLHGDLGSHFPAICDNLISLNISGNSFTGRVDECFDQCLKLQYLDLSTNKLSGGIWMGIAKLRMFSVSENVLSGTIPPSAFPVKCNLEVLDISENMFTGNVPQELANCKNLTILNLSSNKFNGSIPKQVGSISGIEALYLGNNNFSRDIPEELLNLTNLAFLDLTRNQFGGNIQEIFGKFKQVKYLLLHSNNYTGGLSSSGTLKLPNILRLDLSCNNFSGPLPTEISQMSSLKLLMLAYNQFTGPIPLEFGNLPRLQALDLSFNNLSGPIPPTLGKLTSLLWLMLANNSLTGEIPRELGNCSSLLWINLANNKLTGKFPPELANIGRNAMATFESNRQYETVSAGSGECLAMKRWIPADYPPFSFVYDILTRKNCRSIWDRLLKGYGIFPICNAGTFSPLSQISGYVQLSGNQLSGEVPPEIGTMQNLSMLHLGLNRFSGKLPAEVKSLRLVVLNITRNEFSGEIPWEIGTMKCLQNLDLSYNNFSGVFPSSLNNLSELSKFNISYNPLISGEIPSAGQLATFEKYSYLGNPLLHLPSFIDNTTNDQKNTTSHNRALKKSINLSVILVFFALTLAFLIFGLLTVIVCLLIKTPSEEPLLTVSKLDHESGTSSPWLSDIVKVIRLDRTAFTHADILKATGNFSDNRIIGKGGFGTVYRGIFSDGREVAVKKLQREGLEGEKEFRAEMEVLSGHRFGWPHPNLVTLYGWCLDGSEKILVYEYISGGSLEDLVTDRTKFTWKRRLEVAIDVAQALVYLHHECYPSIVHRDVKASNVLLDNKTGKAKVTDFGLARVVDVGGSHVSTMVAGTVGYVAPEYGHTWKATTKGDVYSYGVLAMELATGRRALDGGEECLVEWGRRVIGQGRNRPIGRPVIPVVLMGSGLLEGMEEMMKLLKIGVRCTVETPQARPTMKEVLDMLIKVYNPKSDSSYEHLSHW 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1497 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Prci9g1497 1094 SUPERFAMILY L domain-like 221 480 - -
Prci9g1497 1094 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 245 1078 - -
Prci9g1497 1094 Gene3D Ribonuclease Inhibitor 554 712 IPR032675 -
Prci9g1497 1094 ProSiteProfiles Protein kinase domain profile. 801 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1497 1094 SMART LRR_typ_2 292 316 IPR003591 -
Prci9g1497 1094 SMART LRR_typ_2 413 436 IPR003591 -
Prci9g1497 1094 SMART LRR_typ_2 632 655 IPR003591 -
Prci9g1497 1094 SMART LRR_typ_2 437 461 IPR003591 -
Prci9g1497 1094 SMART LRR_typ_2 103 127 IPR003591 -
Prci9g1497 1094 SMART LRR_typ_2 365 389 IPR003591 -
Prci9g1497 1094 SMART LRR_typ_2 149 176 IPR003591 -
Prci9g1497 1094 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 881 1084 - -
Prci9g1497 1094 SUPERFAMILY Protein kinase-like (PK-like) 785 1077 IPR011009 -
Prci9g1497 1094 ProSitePatterns Protein kinases ATP-binding region signature. 807 830 IPR017441 GO:0005524
Prci9g1497 1094 CDD STKc_IRAK 807 1078 - -
Prci9g1497 1094 Gene3D Ribonuclease Inhibitor 29 172 IPR032675 -
Prci9g1497 1094 SUPERFAMILY L domain-like 567 697 - -
Prci9g1497 1094 FunFam Putative LRR receptor-like serine/threonine-protein kinase 560 707 - -
Prci9g1497 1094 Gene3D Ribonuclease Inhibitor 173 240 IPR032675 -
Prci9g1497 1094 Gene3D Ribonuclease Inhibitor 241 335 IPR032675 -
Prci9g1497 1094 Gene3D Ribonuclease Inhibitor 336 429 IPR032675 -
Prci9g1497 1094 Pfam Leucine rich repeat 85 138 IPR001611 GO:0005515
Prci9g1497 1094 Pfam Leucine rich repeat 150 211 IPR001611 GO:0005515
Prci9g1497 1094 Pfam Leucine rich repeat 369 426 IPR001611 GO:0005515
Prci9g1497 1094 Gene3D Phosphorylase Kinase; domain 1 770 880 - -
Prci9g1497 1094 FunFam Leucine-rich repeat receptor protein kinase MSP1 764 880 - -
Prci9g1497 1094 Gene3D Ribonuclease Inhibitor 430 490 IPR032675 -
Prci9g1497 1094 FunFam Putative LRR receptor-like serine/threonine-protein kinase 340 501 - -
Prci9g1497 1094 SMART serkin_6 801 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1497 1094 SUPERFAMILY RNI-like 66 286 - -
Prci9g1497 1094 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 238 333 - -
Prci9g1497 1094 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Prci9g1497 1094 PRINTS Leucine-rich repeat signature 106 119 - -
Prci9g1497 1094 PRINTS Leucine-rich repeat signature 149 162 - -
Prci9g1497 1094 Gene3D Transferase(Phosphotransferase) domain 1 881 1091 - -
Prci9g1497 1094 Pfam Protein kinase domain 802 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1497 Prci-Chr9 27983363 27987495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1497 57 1092 Receptor kinase-like Gene Family AT1G55610 32.286 5.12e-152 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Prci9g1497 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1497 - - gmx:100783886 1575.07