Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci9g1484 | ATGGTTCTCACGGAAGAACAGAAAAAACGAGCCGAAGCAAACCGGTTGGCGGCAATTGAAAGACGGAAGGCAGTTTTAGAAGCTCGTGGACAGAAAGACCCTTGGCAGCTCTTCAAGTGCCGTAAGATCTCTTCCGAACCAATTGCGAAGCCCACACCTTCCGTTCAACCTCAGTCCGTCTCCGTGGAACCTGTTTCTCCCGCATCTCTGCCCCATAAGTTTTTGGTTAGGCTCGAAATATGCTCACCCGATTCCTTTTCTGCAACTCCTCTTCCCCTCCGGGGTTCCCCCTATCCCGGAGAAGAATGGTGCTTGCGGAGACTAAGTGGTCACTTGACCAATGTCATGCCTTCACACTACACCCAGAATAATGATGGCAGAAACGCCTGTGTGTATAACTTGAGGGATTACCATGCTGTCCTTAAGTGTTTGAAGGCTGTCATGGACATAGAAGTTGAAGAAATTCCGCAGGGAACTTTGAAAGCCGTTGAAGCGTTTTCACATTTCTTTGCTACGGAGCGCTGGACGCCCTGCAGGCCCGAGCATTTGCCTGATGACAAGGTTGATGAGTTAATTGGGACGCTACCAAGGGCTCTGTTGGATGCACTGTTGCCTTTCCAAAGGGATGGTTTAAGATTTGGATTGAGACGGGGTGGCCGGTGTCTTATTGCTGATGAGATGGGCCTTGGGAAAACGCTCCAGGCTATTGCTATTGCAGGATGCTTCTTGAATGAAGGTTCTATACTTGTTGTTTGTCCAGCTGTTTTGCGATTTACATGGGCAGAAGAATTAGAGCGGTGGCTTCCCTGTTGTTTGCCTGCTGATATCCATCTGGTCTTTGGCCATCGAGATAATCCTGCTTATTTAAGAAGATGCCCTAGAATTGTGGTTATTTCTTATACCATGCTCCATCGTTTGAGGAAAAGCATGCTTGGGCAAGAATGGGCCCTCTTGATTGTTGATGAATCTCATCATGTGCGATGTACGAGGAAGACCTCAGAACCAGGGGAGATAAAGGCTGTTCTTGATGTAGCTTCAACTGTCAAGCGCATAATACTGCTATCTGGGACACCTTCTTTGTCAAGGCCATATGACATATTTCATCAGATAAACATGTTATGGCCTGGACTGCTGGGCAAGGATAAATATGCATTTGCTAAAACTTATTGCGATTGTAAATATATCAAGGGAATCCATGGCAAAATTTTTGCGGATTTTTCAAAGGGCATTCGCTTGGAAGAGTTGAATGTGTTACTCAAGCAAACTGTTATGATAAGGCGTCTAAAGGAACATGTGCTGCTACAATTACCACCAAAACGGCGGCAAATTATACGGTTGCTGTTGAAGAGATCAGATGTAGTTGCTGCAAAAAAGGCAGTTGGAAAGTTGAATGGCAGTACTTCCAAAAGTGATACTGACGACATGACCTTGGACAGTTTTGATGAACCTGATGGGATGTTGAAGAGATCAGATGTAGTTGCTGCAGAAACAGCAGTTGGGGTGTCAGATACTGATATTGATACTTCTGAAAGTGTTAATGAAGACATAACTTTGGAAACTTTGGATGAATCTGAAGGGAAGCTTTCCTACCAGGAACTTGGAATTGCAAAGCTTTCTGGATTTCGTGAATGGCTTTCCCTCCATCCAGTCACTGCAGAGTCAGAAAGTGCTTCAAAAATGATAATTTTTGCTCATCACCACAAAGTTCTTGATGGAGTGCAGGAGTTAGTATGTGAGAAAGGAATTAGTTTTGTCCGAATTGATGGAAACACACTTGCTAGGGATAGGCAGTCAGCGGTGGTGTCATTTCGTTCAAGACTGGAGGTTAAAATTGCAATAGTAGGTATTTTAGCAGCAGGATTTGGAGTTGATTTCTCAGCAGCACAAGATGTCGTGTTCTTGGAGCTTCCACAATGCCCAACTCTGATGCTTCAGTTGCACTGGGCACAGTGGATGCGTCAGGTGACTGCATTTGAAAGGAGACACAGAAACGGGAACATGGCTGAGGATAGAGCTCATCGCCGAGGGCAAACAAATGCTGTCAATGTATATATATTTTGCGCAAAGGATACCTGGGATGAGTCACATTGGAAAAATTTGAACAGAAGTTTGCACCGAGTTTCATCGACAACAGATGGTAAATATGATGCAATGAAAGAGATACAGGTTGAAGGTGTTACTTACCTGGACACACTTGTCAAAACCAATAGAAGTTATGAAGAGCAATCTGCATCTGATGAAACTTATGAACAGGTGACCACACTGCTGGATTTTGCCTCAGTTTCAAATTTGCAACCTTCCCAAGCAAACTTTAAGGAATCAGAGGCTGACAAGGTTTCCAGCCCAGAATCAGGCGGGGCTTCTATTTTGGATGTAAATCTGGGTGTAGATCTTTTTGACACCAAGGGAAGATGCTCTGGTATTGACATGAGTAAGATGGACAAGAGTGGACGAAGCAACAAACAGATGGTAGAATTTATTCAGAAGAACAGTGGTGAAGATGATAATCAAGTAGACGAGAATAAACAATTATCAACAATAAAAGCAGATGACTACCATCCTGTTCAGCCAATTGAAGCTGAAGAAAATTCCTCTTGTGCTGAATCTCTACGATTTGAGGTGAGCCCGTACACTGGAAGGATCCACTTGTATACTTGCATTTTGGGTACAGACACAAGACCAAGACCGCTTTTTAAGAATTTCCGACCAGAGGAACTTGAGTTGCTCAGTTCCTTTTCTGATGATGATAAAAAGAAAAAGGAGATCTCTGTCAGGGGTAGTCCTGCTTTTACAAATGCTCTTTTGGAATTTTCAAATGAATGGAAGAAATTGAGGCCAATTGAGCAAAAGAAGTTACTGGGAAAGCCATTACAACTTCCTTTGGCTGTTGAACTGTGCTACTTGAGCGAAACTAGTAGCCACAACAAGAAGGGATTATTAAATGGTGGAAGTAAACGGCGTATGACACCTTTAATGGAAATAAGCCATCCTTTGCCATCAGATGCTGTTTGGAGAAAGATCTATCTGCGAAGTGGCAATGGTAAGAAGGAGAAAGAATACACTCAAGCTTGGACTCTGACAGATGAGCCACTCTGTAAGCTTTGTCAAAAGACGTGCATGGGTAACAATGCGAAGACACCTGAATATTTTGAAGATCTTTTCTGTAACCTTGTCTGCTATGAAGAATATCGTATGAGAACAAGCAATAAATTCCTTCGGCAGGAACTTTTTGAAGTTGAGCATGGTGTGTGCTCAAATTGCCATTTAGACTGTCATAAACTAGTTGAACATATAAGACCTTTGCCAGGAGCAAGACGTAGAGAGTACATTGAGAAAGTGGCACCAAATGTGGCTGGGCGAAAGAACATGCTTGAGAAGCTTGTCAAGGATCCAACTGAGGGCAATGCGTGGCATGCTGATCATATTGTTCCAGTATATCAAGGTGGAGGTGAATGTCGGCTAGAGAATATGAGGACTCTTTGTGTGGCCTGCCACTATGATGTTACAACAGCACAGTGTACTGAGCGACGCAAAGAGAGAGCCAAGGCCAGGAAACAGCTAAAAGTAGTTATGAGCGAGTTAAAAGCAGGTCAAATGAAGGTCACCACAGGTTCTAATACTAAGGAGCGGGGTCTTCTTGGGTTACAGGAGGATGGAAACGAGGACGAGCTCATTGTCAAGGTGCCTGGAAGTGCCTATTCAGTAGCCATGGCTAAGAAAGTGGAGGAGCATCCTCGAAGGCCTCTTCTATGA | 3753 | 0.4388 | MVLTEEQKKRAEANRLAAIERRKAVLEARGQKDPWQLFKCRKISSEPIAKPTPSVQPQSVSVEPVSPASLPHKFLVRLEICSPDSFSATPLPLRGSPYPGEEWCLRRLSGHLTNVMPSHYTQNNDGRNACVYNLRDYHAVLKCLKAVMDIEVEEIPQGTLKAVEAFSHFFATERWTPCRPEHLPDDKVDELIGTLPRALLDALLPFQRDGLRFGLRRGGRCLIADEMGLGKTLQAIAIAGCFLNEGSILVVCPAVLRFTWAEELERWLPCCLPADIHLVFGHRDNPAYLRRCPRIVVISYTMLHRLRKSMLGQEWALLIVDESHHVRCTRKTSEPGEIKAVLDVASTVKRIILLSGTPSLSRPYDIFHQINMLWPGLLGKDKYAFAKTYCDCKYIKGIHGKIFADFSKGIRLEELNVLLKQTVMIRRLKEHVLLQLPPKRRQIIRLLLKRSDVVAAKKAVGKLNGSTSKSDTDDMTLDSFDEPDGMLKRSDVVAAETAVGVSDTDIDTSESVNEDITLETLDESEGKLSYQELGIAKLSGFREWLSLHPVTAESESASKMIIFAHHHKVLDGVQELVCEKGISFVRIDGNTLARDRQSAVVSFRSRLEVKIAIVGILAAGFGVDFSAAQDVVFLELPQCPTLMLQLHWAQWMRQVTAFERRHRNGNMAEDRAHRRGQTNAVNVYIFCAKDTWDESHWKNLNRSLHRVSSTTDGKYDAMKEIQVEGVTYLDTLVKTNRSYEEQSASDETYEQVTTLLDFASVSNLQPSQANFKESEADKVSSPESGGASILDVNLGVDLFDTKGRCSGIDMSKMDKSGRSNKQMVEFIQKNSGEDDNQVDENKQLSTIKADDYHPVQPIEAEENSSCAESLRFEVSPYTGRIHLYTCILGTDTRPRPLFKNFRPEELELLSSFSDDDKKKKEISVRGSPAFTNALLEFSNEWKKLRPIEQKKLLGKPLQLPLAVELCYLSETSSHNKKGLLNGGSKRRMTPLMEISHPLPSDAVWRKIYLRSGNGKKEKEYTQAWTLTDEPLCKLCQKTCMGNNAKTPEYFEDLFCNLVCYEEYRMRTSNKFLRQELFEVEHGVCSNCHLDCHKLVEHIRPLPGARRREYIEKVAPNVAGRKNMLEKLVKDPTEGNAWHADHIVPVYQGGGECRLENMRTLCVACHYDVTTAQCTERRKERAKARKQLKVVMSELKAGQMKVTTGSNTKERGLLGLQEDGNEDELIVKVPGSAYSVAMAKKVEEHPRRPLL | 1250 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci9g1484 | 1250 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 546 | 722 | IPR001650 | - | |
| Prci9g1484 | 1250 | Coils | Coil | 9 | 29 | - | - | |
| Prci9g1484 | 1250 | CDD | HNHc | 1129 | 1169 | IPR003615 | - | |
| Prci9g1484 | 1250 | Pfam | HNH endonuclease | 1134 | 1166 | IPR002711 | GO:0003676|GO:0004519|GO:0008270 | |
| Prci9g1484 | 1250 | Gene3D | - | 453 | 765 | IPR027417 | - | |
| Prci9g1484 | 1250 | PANTHER | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER | 5 | 645 | - | - | |
| Prci9g1484 | 1250 | CDD | SF2_C_SNF | 536 | 687 | - | - | |
| Prci9g1484 | 1250 | SMART | ultradead3 | 199 | 383 | IPR014001 | - | |
| Prci9g1484 | 1250 | FunFam | SNF2 DNA repair protein, putative | 176 | 426 | - | - | |
| Prci9g1484 | 1250 | Pfam | Helicase conserved C-terminal domain | 553 | 645 | IPR001650 | - |
Showing 1 to 10 of 16 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci9g1484 | K25861 | - | pcin:129320183 | 2443.69 |
Showing 1 to 1 of 1 entries