Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1434 ATGGCACCGGCAATGGTGGCAAACGTTGCAGCCAGAAGCAGCCTCCGGCGTCTCACATTAGGAGCGGGTAAATCCTCGCGTATCCTGCAAAATCGTGTCCATTGTTTCTCAACGGTTTCCAGTTCTATCAACCCCTTTCATCCAAAATTATCCCAGCAATCTCAGTACAGGAAAGAGGTTTCACTTGCCAATCTCTTCCAAAGGTACGGGTTCCCACCATCGCAGATTCAAGGTTTTCTTGCAAAGAATCGTTTCCTCTTGAATTCCAAATTACAGGAGTTAGAGAAGTGTTTGGCTACTCTATTATCTTTCAGGATTCCGCAAAACTCTCTCATTTCTTTGATACGCGATTGTCCTGGGCTATTGGAACACCAGTTTCTCAAGAAATGGGAAGCATGTTTCTCACAGCTGCACGTTTTGACTCCTTCCCCCGTTATGATCAGAAATTTCTTGCGATACTCTAGGAGGTATCAGCTAGATCCTGGTGAACTTTCAAAAAGCATTGAGATCTTGCGGGGTTTAGGCTTTACTCATGTTGCTGTTGCTCGGGTCTTCGAGGACTTCCCTACTGTGGTCGTGATGAATAAGGGAGAAATTCTTTCTGTAATTGAATTCCTTATGGAAATTGGGGTTCCCAGGGATAAGATTGATCGAGTAATAAGTTTGCATCCTAGAGTTTTGGGACTTGGGATCGAAGACCGGCTGAAGCCGTTGCTCCGTGAGTTGAGCGATTTGGGATTTTGTGATGATGAGATTATAAAAGAGATAATTAGGGAGCCCAAGATTCTGGGAATGGAACTAGGGGAATTTTCGCGATGTTTTCAATTGCTCAAGACGTTGAAATGTCGAGAGCCGATCAAAGAGAGGATTTTCCAAGAGGGTACTCTGAGAGCTGGTTTTGAAGTAAAATTGAGATTAGATTGCTTGTGCAGTCACGGGTTAATTCGTAGAGATGCTTTCAAGGTCTTGTGGAAAGAACCGAGGTTGATTACATATGACTTAGAGAACATTGAAAAGAAGATTGACTTTTTAGTGCACAGGATGGAATATAGTGTTGATTGTTTACCTGATGTTCCAGAATATTTGGGTGTAAATTTCGAAAAGCAGATTGTTCCTCGATACAGTGTGATGGAGTATTTGAAAGCAAAAGGTGCAATTGACTTTGAGGTGAGATTGAAGGATTTGATTAAGCCAAGTAGACTTAGATTTTACAATCTATATGTCAAACCCTTCCCAGAATGTGAAAAACTGTATGGAAGATATTCAGGAAATGTTGAAGTTAAAAGCAAGCATCCAACCGGACTCTGGAAAATCTTTAAACCGCGAAAGTACCCTGAAACCAACGAAGATGTCAAAAACATAAAGTCCTTTATGGATGGAGTAGTGTAG 1389 0.4183 MAPAMVANVAARSSLRRLTLGAGKSSRILQNRVHCFSTVSSSINPFHPKLSQQSQYRKEVSLANLFQRYGFPPSQIQGFLAKNRFLLNSKLQELEKCLATLLSFRIPQNSLISLIRDCPGLLEHQFLKKWEACFSQLHVLTPSPVMIRNFLRYSRRYQLDPGELSKSIEILRGLGFTHVAVARVFEDFPTVVVMNKGEILSVIEFLMEIGVPRDKIDRVISLHPRVLGLGIEDRLKPLLRELSDLGFCDDEIIKEIIREPKILGMELGEFSRCFQLLKTLKCREPIKERIFQEGTLRAGFEVKLRLDCLCSHGLIRRDAFKVLWKEPRLITYDLENIEKKIDFLVHRMEYSVDCLPDVPEYLGVNFEKQIVPRYSVMEYLKAKGAIDFEVRLKDLIKPSRLRFYNLYVKPFPECEKLYGRYSGNVEVKSKHPTGLWKIFKPRKYPETNEDVKNIKSFMDGVV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1434 462 Gene3D Transcription termination factor 3, mitochondrial 196 418 IPR038538 -
Prci9g1434 462 Pfam mTERF 67 277 IPR003690 GO:0003690|GO:0006355
Prci9g1434 462 Pfam mTERF 305 403 IPR003690 GO:0003690|GO:0006355
Prci9g1434 462 SMART mt_12 217 248 IPR003690 GO:0003690|GO:0006355
Prci9g1434 462 SMART mt_12 147 177 IPR003690 GO:0003690|GO:0006355
Prci9g1434 462 SMART mt_12 352 386 IPR003690 GO:0003690|GO:0006355
Prci9g1434 462 SMART mt_12 253 283 IPR003690 GO:0003690|GO:0006355
Prci9g1434 462 SMART mt_12 77 107 IPR003690 GO:0003690|GO:0006355
Prci9g1434 462 SMART mt_12 182 212 IPR003690 GO:0003690|GO:0006355
Prci9g1434 462 SMART mt_12 320 351 IPR003690 GO:0003690|GO:0006355
Prci9g1434 462 PANTHER CGI-12 PROTEIN-RELATED 155 410 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1434 Prci-Chr9 27613649 27631762 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci9g1434 mTERF 7.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1434 - - pcin:129319850 916.761