Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1433 ATGGCACCGGCAATGGTGGCAAACGTTGCAGCCAGAAGCAGCCTCCGGCGTCTCACATTAGGAGCGGGTAAATCCTCGCGTATCCTGCAAAATCGTGTCCATTGTTTCTCAACGGTTTCCAGTTCTATCAACCCCTTTCATCCAAAATTATCCCAGCAATCTCAGTACAGGAAAGAGGTTTCACTTGCCAATCTCTTCCAAAGGATTCCGCAAAACTCTCTCATTTCTTTGATACGCGATTGTCCTGGGCTATTGGAACACCAGTTTCTCAAGAAATGGGAAGCATGTTTCTCACAGCTGCACGTTTTGACTCCTTCCCCCGTTATGATCAGAAATTTCTTGCGATACTCTAGGAGGTATCAGCTAGATCCTGGTGAACTTTCAAAAAGCATTGAGATCTTGCGGGGTTTAGGCTTTACTCATGTTGCTGTTGCTCGGGTCTTCGAGGACTTCCCTACTGTGGTCGTGATGAATAAGGGAGAAATTCTTTCTGTAATTGAATTCCTTATGGAAATTGGGGTTCCCAGGGATAAGATTGATCGAGTAATAAGTTTGCATCCTAGAGTTTTGGGACTTGGGATCGAAGACCGGCTGAAGCCGTTGCTCCGTGAGTTGAGCGATTTGGGATTTTGTGATGATGAGATTATAAAAGAGATAATTAGGGAGCCCAAGATTCTGGGAATGGAACTAGGGGAATTTTCGCGATGTTTTCAATTGCTCAAGACGTTGAAATGTCGAGAGCCGATCAAAGAGAGGATTTTCCAAGAGGGTACTCTGAGAGCTGGTTTTGAAGTAAAATTGAGATTAGATTGCTTGTGCAGTCACGGGTTAATTCGTAGAGATGCTTTCAAGGTCTTGTGGAAAGAACCGAGGTTGATTACATATGACTTAGAGAACATTGAAAAGAAGATTGACTTTTTAGTGCACAGGATGGAATATAGTGTTGATTGTTTACCTGATGTTCCAGAATATTTGGGTGTAAATTTCGAAAAGCAGATTGTTCCTCGATACAGTGTGATGGAGTATTTGAAAGCAAAAGGTGCAATTGACTTTGAGGTGAGATTGAAGGATTTGATTAAGCCAAGTAGACTTAGATTTTACAATCTATATGTCAAACCCTTCCCAGAATGTGAAAAACTGTATGGAAGATATTCAGGAAATGTTGAAGTTAAAAGCAAGCATCCAACCGGACTCTGGAAAATCTTTAAACCGCGAAAGTACCCTGAAACCAACGAAGATGTCAAAAACATAAAGTCCTTTATGGATGGAGTAGTGTAG 1278 0.4194 MAPAMVANVAARSSLRRLTLGAGKSSRILQNRVHCFSTVSSSINPFHPKLSQQSQYRKEVSLANLFQRIPQNSLISLIRDCPGLLEHQFLKKWEACFSQLHVLTPSPVMIRNFLRYSRRYQLDPGELSKSIEILRGLGFTHVAVARVFEDFPTVVVMNKGEILSVIEFLMEIGVPRDKIDRVISLHPRVLGLGIEDRLKPLLRELSDLGFCDDEIIKEIIREPKILGMELGEFSRCFQLLKTLKCREPIKERIFQEGTLRAGFEVKLRLDCLCSHGLIRRDAFKVLWKEPRLITYDLENIEKKIDFLVHRMEYSVDCLPDVPEYLGVNFEKQIVPRYSVMEYLKAKGAIDFEVRLKDLIKPSRLRFYNLYVKPFPECEKLYGRYSGNVEVKSKHPTGLWKIFKPRKYPETNEDVKNIKSFMDGVV 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1433 425 SMART mt_12 145 175 IPR003690 GO:0003690|GO:0006355
Prci9g1433 425 SMART mt_12 216 246 IPR003690 GO:0003690|GO:0006355
Prci9g1433 425 SMART mt_12 110 140 IPR003690 GO:0003690|GO:0006355
Prci9g1433 425 SMART mt_12 315 349 IPR003690 GO:0003690|GO:0006355
Prci9g1433 425 SMART mt_12 180 211 IPR003690 GO:0003690|GO:0006355
Prci9g1433 425 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Prci9g1433 425 Gene3D Transcription termination factor 3, mitochondrial 159 381 IPR038538 -
Prci9g1433 425 Pfam mTERF 268 366 IPR003690 GO:0003690|GO:0006355
Prci9g1433 425 Pfam mTERF 69 240 IPR003690 GO:0003690|GO:0006355
Prci9g1433 425 PANTHER CGI-12 PROTEIN-RELATED 73 373 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1433 Prci-Chr9 27613649 27631762 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci9g1433 mTERF 1.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1433 - - pcin:129319850 825.469