Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1429 ATGGAGTCCTGGAGTTATGATTCTGACGAAAAAGGGTTTGCGTCCAATGATACACTCTCACCTCCTAATGCACTTTCGAGAAGTAAAGGTTCCATCTTGGAATGGGAATTTAAGAGTCCCCCTGGTATTTCCAGCGACATGTTATCCTCGGGTCAACCTAACGTAGGAAATCAAGGTTTTGAGGAAATGGGTTTTCCAGAAATGTTGGGTAAACGATTGTCCGATGATCCGATTGGCAGTGTTCCGAGCAGAAAGCTCGAAGGTGGTCCTTTTATGACCGCCGCCCCAATTGCGATTTCTAGAGTTGAGGATTCCAATTCCAGGCTTTCCAACTCTCTGGTTGAATCTAACGGTCGGGATTCGCTCATTGATTTGAAGCTGGGACGATTTGGCGATCCCAGAGAAGCCACGGATTCGGCATTCTCCAGAGGAACCCCTATTTTGTCTTCTTCAGAATCATCGGCTCCGACCAAGAGAGTACGAGGTTCAGGGGTTCATTCACAAACCGCCTACTGTCAAGTTTATGGATGTCATAAGGATCTGAGCGCCTCTAAAGACTACCACAAGAGGCATAAAGTTTGCGAGGTTCACTCCAAGACTTCCAAAGTTATAGTCAACGGCATCGAACAGAGATTTTGTCAGCAATGTAGTAGGTTTCACTTGCTGGCTGAATTTGATGATGGTAAGCGCAGCTGTCGCAAACGCCTTGCAGGTCATAATGAGCGTCGGCGAAAGCCACAAGTCGGTGTTAGCTCTGGAAAAGCTGCAAGATTGCTTCAATCATACAGCGATGGCAGGTTCCACGACACCATGCTAACAACTGCATCTTTTATCTGCCAAGAGATACTTCCCACCGGGACTTTGCGCTCTGATGAATATGGAACAAATGACTGGTGGAGACCTATGAAGAACGAAGATGGGACTGATTTTAGGCATCTGCCTGCCATTCATCCTCAGTCAAGATCTCTATTCCCTTCATATAATGAAAGACAATTTCCGTTTCTTCATGAAAATGGCGCGACAACCAGTACGGGAAGCATCTTCTGTGAGAACAACAATCAGTTTCCACCTCCTCCCATGGGCCCAAATTCTGGGGCACAATCTTTATTCCAAGACACCTCCTTAAGAAGTGGGGGCTTCAATGTTTATGACTCGACATCGACTATTCAAGGACTATCGGGAGTTTCAGACTCTGGCTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCTTCAAGCCACTCATCAGGAATTCCCATGGCACGCCCCTTGGTCATTCCAAGCAGCAGCCATAGTAATTACAGCCAGAGTCAGCTCACTGAAAAGATCATAGGAATGAGCTCACAGGCCTCCACAAGTGGAGTTTCAGATCGGTTTCGATCCAAGATGAACCCTGCCATTGATGGAAGTCATCTTAGTCCCGTACTGATGTCAGACAATAGCAATATTCTCCATTTTGCAATGGCAGATGGTATGTTCCAAGGGCCTGGTTTTGTGAACATTAAAGATGGTCTTCCCTGTGAAGATGGCCCAACCATTGACTTGCTTCAACTATCATCGCAGCTCCAGCGAGTTGAGCATCAAAGGCAATCCTCGAAGGTCAAGGAAGAAAATGATTCTTCCTGCTCTCTCCGGACTACTTAA 1647 0.4657 MESWSYDSDEKGFASNDTLSPPNALSRSKGSILEWEFKSPPGISSDMLSSGQPNVGNQGFEEMGFPEMLGKRLSDDPIGSVPSRKLEGGPFMTAAPIAISRVEDSNSRLSNSLVESNGRDSLIDLKLGRFGDPREATDSAFSRGTPILSSSESSAPTKRVRGSGVHSQTAYCQVYGCHKDLSASKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVGVSSGKAARLLQSYSDGRFHDTMLTTASFICQEILPTGTLRSDEYGTNDWWRPMKNEDGTDFRHLPAIHPQSRSLFPSYNERQFPFLHENGATTSTGSIFCENNNQFPPPPMGPNSGAQSLFQDTSLRSGGFNVYDSTSTIQGLSGVSDSGCALSLLSSQSQNSSSHSSGIPMARPLVIPSSSHSNYSQSQLTEKIIGMSSQASTSGVSDRFRSKMNPAIDGSHLSPVLMSDNSNILHFAMADGMFQGPGFVNIKDGLPCEDGPTIDLLQLSSQLQRVEHQRQSSKVKEENDSSCSLRTT 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1429 548 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 50 538 IPR044817 GO:0003677
Prci9g1429 548 Pfam SBP domain 172 245 IPR004333 GO:0003677
Prci9g1429 548 MobiDBLite consensus disorder prediction 142 163 - -
Prci9g1429 548 SUPERFAMILY SBT domain 170 249 IPR036893 GO:0003677|GO:0005634
Prci9g1429 548 Gene3D - 162 233 IPR036893 GO:0003677|GO:0005634
Prci9g1429 548 MobiDBLite consensus disorder prediction 528 548 - -
Prci9g1429 548 MobiDBLite consensus disorder prediction 135 163 - -
Prci9g1429 548 FunFam Squamosa promoter-binding-like protein 14 163 233 - -
Prci9g1429 548 ProSiteProfiles Zinc finger SBP-type profile. 169 246 IPR004333 GO:0003677
Prci9g1429 548 MobiDBLite consensus disorder prediction 529 548 - -
Prci9g1429 548 MobiDBLite consensus disorder prediction 8 27 - -
Prci9g1429 548 MobiDBLite consensus disorder prediction 411 433 - -
Prci9g1429 548 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1429 Prci-Chr9 27566618 27571497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1429 123 288 SBP-box Gene Family AT1G69170 55.422 3.38e-51 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Prci9g1429 SBP 3.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1429 - - gmx:100777766 715.687