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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Prci9g1426
ATGGGAAGGGGGAAAGTTGAACTCAAGAGAATAGAGAACAAAATCAATAGGCAGGTCACATTTGCCAAGAGAAGAAATGGGCTGCTCAAGAAGGCTTATGAACTCTCTGTCCTCTGTGATGCTGAGGTTGCGCTTATCATCTTCTCCAATCGTGGCAAGCTCTATGAGTTCAGCAGTGGCTCCAGCATGATGAACACACTGGAGAAGTACCAGAAGAACAGCTATGGTGCACTAGAGTCAAGCCAGCAAATGAATCACACTCAGAGTAGCTACCAGGAATACTTGAGACTTAAAGCAAGGGTTGAAGTCCTGCAACGTTCACAGAGGAACCTTCTTGGGGAAGATCTGGCCCAAATGAATACAAAGGAACTAGAACAGCTTGAGAATCAAGTTGAGGCAGCACTGAAGAACATCAGGTCCACAAAGACTCAGTATATGCTCGACCAGCTTGCGGATCTTCAGAACCGGGAGAAAGTGCTGGAGGAAACTAACAGAGCTTTGAGGAGTAAGTTAGTAGAAGGAAGCGAGTCGCAAGTTCCTCTCAGAATGGGTTGGGAAGGTGCAGGAGGGTCTGAGACGATCCATTGCACTCGCTTTTCTGCTCAATCTGAAGCATTTTTTCAGCCTTTGGGAGTCAATCCCAATTTGCAAATCGGATATAATCAGGTGGGAGGAGAGGATGTACATGTTGGATGCGCAGCATTGAATCTTCATGGATTCGTGCCTGGGTGGATGCTTTAA
741
0.4656
MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSSGSSMMNTLEKYQKNSYGALESSQQMNHTQSSYQEYLRLKARVEVLQRSQRNLLGEDLAQMNTKELEQLENQVEAALKNIRSTKTQYMLDQLADLQNREKVLEETNRALRSKLVEGSESQVPLRMGWEGAGGSETIHCTRFSAQSEAFFQPLGVNPNLQIGYNQVGGEDVHVGCAALNLHGFVPGWML
246
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Prci9g1426
246
ProSiteProfiles
K-box domain profile.
87
177
IPR002487
GO:0003700|GO:0005634|GO:0006355
Prci9g1426
246
PANTHER
SERUM RESPONSE FACTOR HOMOLOG
3
161
-
-
Prci9g1426
246
ProSitePatterns
MADS-box domain signature.
3
57
IPR002100
GO:0003677|GO:0046983
Prci9g1426
246
SMART
madsneu2
1
60
IPR002100
GO:0003677|GO:0046983
Prci9g1426
246
Pfam
K-box region
82
171
IPR002487
GO:0003700|GO:0005634|GO:0006355
Prci9g1426
246
Gene3D
-
13
87
IPR036879
GO:0003677|GO:0046983
Prci9g1426
246
CDD
MADS_MEF2_like
2
78
IPR033896
GO:0000977|GO:0045944
Prci9g1426
246
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
10
57
IPR002100
GO:0003677|GO:0046983
Prci9g1426
246
SUPERFAMILY
SRF-like
2
78
IPR036879
GO:0003677|GO:0046983
Prci9g1426
246
PRINTS
MADS domain signature
23
38
IPR002100
GO:0003677|GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Prci9g1426
Prci-Chr9
27542683
27547119
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Prci9g1426
1
246
MADS-box Gene Family
AT5G15800
57.414
5.90e-91
267
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-MIKC
Prci9g1426
K-box
9.1e-27
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Prci9g1426
K09264
-
gmx:100797819
350.517
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