Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1419 ATGGAGCTTCCTCAAGCGCGCCCCTTTGGAACCGAAGCAAGAAAACCGACGCATGACTCACTGTCACTGTACAGTCATTCAACTGCCCAGCACGATCCGAGGCCACCATGCCAAGGAAGTTACCTGAAGACTCGTGATTTCTTGCAGCCACTAGAACGGGTTGAGAAGAAAGCAAACACGAAGGAAGAAGCATCGGATGAGATATCATCAGTGGTTCAAAAGCTGCCGCCTTCTGCGCCGCCGCCGCCGCCATGTGTTGAGCACATCCTACCTGGAGGCATTGGGACTTACAGTATCAGCCACATTTCCTATTGTAGTAATCCCAGGGTTCCAAAGCCGGAGGCTACCCTTTTCACTGTGTCTCCTTGTGAAGCGAGTACAGATAGAAATGAGGAGAACTCCAACTGCAGTTCATACACTGGAAGTGGTTTCACTTTGTGGGAAGAGTCTACCGTTAAGAAGGGAAAGACAGGGAAGGAGAATGAGGTGGGAGAGAAATCCGTTATAGCAGAGTGCGCGGCCAAGCCGGGGCAGTGGTCGGTGACGGAGAGAGCATCTCAGTCATTTGTTAAGAATCATCAGAATAGCTTCAATTCTGCCACTTCCTCTCAGAAAACTGGGCAGAAGAACCAGAGTTTTATTGATATGATAAAATCTGCCAAGGATTGCTCTCAGGATGAGGAGTTAGACAACGAAGAAGCATTCATCTTTAAGAAAGAATCCTCAAATACCCAACAAAGAGGGGAATTGAGAGTGAAAGTGGACGGGAAGAGCTCTGAACAAAGGCCAAACACACCGCGATCAAAACATTCTGCAACAGAACAGCGTAGAAGGAGCAAAATTAATGACAGATTCCAGATGTTGAGGGAGCTTATTCCACATAGTGACCAGAAAAGAGATAAGGCATCTTTTCTGTTGGAGGTTATTGAGTACATTCAGTTTTTACAAGATAAGGTTCATAGGCACGAAGGTTCATACCAAGTGTGGAACCAAGAGAAAGAAAAATTGACTCCATGGCAGAGGAATAATCACAGGCGTTCAGAAAGCTATGATGATCAATCTCGCGTCATAAATAGCGGGTCACCTCCTCCTCCCATATTACTGTTCCCTTCAAAGATGGAGGAGGAAAATTTTAGCATCTCCCCAACAATTACTGGGGCCACAAAGAACGTAGATGCTGGAACTAGTTCTGCAACTACATTGAAGTCAATGAATCAACATCCTGGAATGACCAATAAGGCCGTGCCAATTCCTAACTCTCCACAGCCAAATTTCTTCAATCCTGTTCGAAGTGGCGGTCCAGGTAGATTGGTGTCTCAGCTCACACACAAGCTAACGTCAGATGCTGAAAACACCTTGTGTAATCCCTTGGGGCAATCTCAGACTTACTCTTCTGCTACAGGGGTGACTGCTGCTAGTGATAAGCTTAAAGAGAAAGAGCTCACCGTTGAAAGCGGTGCTATTAGCATATCAAGTGTGTACTCAAAAGGGTTGCTGGATTCACTAACGCATGCACTGAAGAATTCAGGAGTGGATTTGTCACAGGCTAGCATCTCAGTGCAAATTGAGCTTGGTAAGCAAGCAAACATCGGACCAATTGGACCAACTTCTGGAGTAAAGGATGAAGTTACTTGTACCAAGCAGGGGATGAAGCGCTCTAGAGTTTGTAGCGTAGAGGAGTCTGACCTAGCAGTGAAGAAGCTGAAGACAAGCAGAAGTTGA 1722 0.4623 MELPQARPFGTEARKPTHDSLSLYSHSTAQHDPRPPCQGSYLKTRDFLQPLERVEKKANTKEEASDEISSVVQKLPPSAPPPPPCVEHILPGGIGTYSISHISYCSNPRVPKPEATLFTVSPCEASTDRNEENSNCSSYTGSGFTLWEESTVKKGKTGKENEVGEKSVIAECAAKPGQWSVTERASQSFVKNHQNSFNSATSSQKTGQKNQSFIDMIKSAKDCSQDEELDNEEAFIFKKESSNTQQRGELRVKVDGKSSEQRPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQFLQDKVHRHEGSYQVWNQEKEKLTPWQRNNHRRSESYDDQSRVINSGSPPPPILLFPSKMEEENFSISPTITGATKNVDAGTSSATTLKSMNQHPGMTNKAVPIPNSPQPNFFNPVRSGGPGRLVSQLTHKLTSDAENTLCNPLGQSQTYSSATGVTAASDKLKEKELTVESGAISISSVYSKGLLDSLTHALKNSGVDLSQASISVQIELGKQANIGPIGPTSGVKDEVTCTKQGMKRSRVCSVEESDLAVKKLKTSRS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1419 573 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 12 571 IPR044295 GO:0003700|GO:0006351|GO:0046983
Prci9g1419 573 MobiDBLite consensus disorder prediction 244 281 - -
Prci9g1419 573 CDD bHLH_AtBIM_like 264 340 - -
Prci9g1419 573 Pfam Helix-loop-helix DNA-binding domain 267 316 IPR011598 GO:0046983
Prci9g1419 573 MobiDBLite consensus disorder prediction 1 41 - -
Prci9g1419 573 MobiDBLite consensus disorder prediction 18 34 - -
Prci9g1419 573 MobiDBLite consensus disorder prediction 54 68 - -
Prci9g1419 573 MobiDBLite consensus disorder prediction 234 281 - -
Prci9g1419 573 MobiDBLite consensus disorder prediction 339 364 - -
Prci9g1419 573 Gene3D - 263 337 IPR036638 GO:0046983
Prci9g1419 573 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 336 IPR036638 GO:0046983
Prci9g1419 573 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 315 IPR011598 GO:0046983
Prci9g1419 573 MobiDBLite consensus disorder prediction 54 84 - -
Prci9g1419 573 SMART finulus 271 321 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1419 Prci-Chr9 27461726 27467945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1419 1 528 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 49.094 1.32e-122 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci9g1419 HLH 2.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1419 - - adu:107468970 687.567