Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1418 ATGGAGCTTCCTCAAGCGCGCCCCTTTGGAACCGAAGCAAGAAAACCGACGCATGACTCACTGTCACTGTACAGTCATTCAACTGCCCAGCACGATCCGAGGCCACCATGCCAAGGAAGTTACCTGAAGACTCGTGATTTCTTGCAGCCACTAGAACGGGTTGAGAAGAAAGCAAACACGAAGGAAGAAGCATCGGATGAGATATCATCAGTGGTTCAAAAGCTGCCGCCTTCTGCGCCGCCGCCGCCGCCATGTGTTGAGCACATCCTACCTGGAGGCATTGGGACTTACAGTATCAGCCACATTTCCTATTGTAGTAATCCCAGGGTTCCAAAGCCGGAGGCTACCCTTTTCACTGTGTCTCCTTGTGAAGCGAGTACAGATAGAAATGAGGAGAACTCCAACTGCAGTTCATACACTGGAAGTGGTTTCACTTTGTGGGAAGAGTCTACCGTTAAGAAGGGAAAGACAGGGAAGGAGAATGAGGTGGGAGAGAAATCCGTTATAGCAGAGTGCGCGGCCAAGCCGGGGCAGTGGTCGGTGACGGAGAGAGCATCTCAGTCATTTGTTAAGAATCATCAGAATAGCTTCAATTCTGCCACTTCCTCTCAGAAAACTGGGCAGAAGAACCAGAGTTTTATTGATATGATAAAATCTGCCAAGGATTGCTCTCAGGATGAGGAGTTAGACAACGAAGAAGCATTCATCTTTAAGAAAGAATCCTCAAATACCCAACAAAGAGGGGAATTGAGAGTGAAAGTGGACGGGAAGAGCTCTGAACAAAGGCCAAACACACCGCGATCAAAACATTCTGCAACAGAACAGCGTAGAAGGAGCAAAATTAATGACAGATTCCAGATGTTGAGGGAGCTTATTCCACATAGTGACCAGAAAAGAGATAAGGCATCTTTTCTGTTGGAGGTTATTGAGTACATTCAGTTTTTACAAGATAAGGTTCATAGGCACGAAGGTTCATACCAAGTGTGGAACCAAGAGAAAGAAAAATTGACTCCATGGCAGAGGAATAATCACAGGCGTTCAGAAAGCTATGATGATCAATCTCGCGTCATAAATAGCGGGTCACCTCCTCCTCCCATATTACTGTTCCCTTCAAAGATGGAGGAGGAAAATTTTAGCATCTCCCCAACAATTACTGGGGCCACAAAGAACGTAGATGCTGGAACTAGTTCTGCAACTACATTGAAGTCAATGAATCAACATCCTGGAATGACCAATAAGGCCGTGCCAATTCCTAACTCTCCACAGCCAAATTTCTTCAATCCTGTTCGAAGTGGCGGTCCAGGGGTGACTGCTGCTAGTGATAAGCTTAAAGAGAAAGAGCTCACCGTTGAAAGCGGTGCTATTAGCATATCAAGTGTGTACTCAAAAGGGTTGCTGGATTCACTAACGCATGCACTGAAGAATTCAGGAGTGGATTTGTCACAGGCTAGCATCTCAGTGCAAATTGAGCTTGGTAAGCAAGCAAACATCGGACCAATTGGACCAACTTCTGGAGTAAAGGATGAAGTTACTTGTACCAAGCAGGGGATGAAGCGCTCTAGAGTTTGTAGCGTAGAGGAGTCTGACCTAGCAGTGAAGAAGCTGAAGACAAGCAGAAGTTGA 1623 0.4621 MELPQARPFGTEARKPTHDSLSLYSHSTAQHDPRPPCQGSYLKTRDFLQPLERVEKKANTKEEASDEISSVVQKLPPSAPPPPPCVEHILPGGIGTYSISHISYCSNPRVPKPEATLFTVSPCEASTDRNEENSNCSSYTGSGFTLWEESTVKKGKTGKENEVGEKSVIAECAAKPGQWSVTERASQSFVKNHQNSFNSATSSQKTGQKNQSFIDMIKSAKDCSQDEELDNEEAFIFKKESSNTQQRGELRVKVDGKSSEQRPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQFLQDKVHRHEGSYQVWNQEKEKLTPWQRNNHRRSESYDDQSRVINSGSPPPPILLFPSKMEEENFSISPTITGATKNVDAGTSSATTLKSMNQHPGMTNKAVPIPNSPQPNFFNPVRSGGPGVTAASDKLKEKELTVESGAISISSVYSKGLLDSLTHALKNSGVDLSQASISVQIELGKQANIGPIGPTSGVKDEVTCTKQGMKRSRVCSVEESDLAVKKLKTSRS 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1418 540 MobiDBLite consensus disorder prediction 234 282 - -
Prci9g1418 540 MobiDBLite consensus disorder prediction 54 83 - -
Prci9g1418 540 Pfam Helix-loop-helix DNA-binding domain 267 316 IPR011598 GO:0046983
Prci9g1418 540 CDD bHLH_AtBIM_like 264 340 - -
Prci9g1418 540 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 336 IPR036638 GO:0046983
Prci9g1418 540 Gene3D - 263 337 IPR036638 GO:0046983
Prci9g1418 540 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 12 538 IPR044295 GO:0003700|GO:0006351|GO:0046983
Prci9g1418 540 MobiDBLite consensus disorder prediction 18 34 - -
Prci9g1418 540 MobiDBLite consensus disorder prediction 244 282 - -
Prci9g1418 540 MobiDBLite consensus disorder prediction 54 68 - -
Prci9g1418 540 MobiDBLite consensus disorder prediction 1 41 - -
Prci9g1418 540 MobiDBLite consensus disorder prediction 339 364 - -
Prci9g1418 540 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 315 IPR011598 GO:0046983
Prci9g1418 540 SMART finulus 271 321 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1418 Prci-Chr9 27461721 27467945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1418 1 495 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 50.000 5.07e-123 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci9g1418 HLH 2.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1418 - - adu:107468970 665.611