Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1406 ATGGGGTGCTCGTTTTCTGGGTTGAATGCGCTATACGACGCCGTTAATGGAGGAGGGGATGTCTGGATCAATGAGAACCGATTCCGAATCGTCAGGCAGCTCGGGGAAGGTGGGTTCGCCTTCGTCTATTTGGTTAGGGAGGTGGTCGCTGACTCCTCTCCCTCCTCTGCTGGCGGTGGTCTCTCTAAGAAGCTTAAAGACTCCTCTCATGTATCTGAAGATGGAATTTATGCCATGAAAAAGATCCTCATTCAGAATGGTGAACAGTTGGAGTTGGTGAGGGAGGAGATCCGTGTCTCGTCACTGTTTAGTCATCGAAATCTGCTCCCGCTTCTTGATCATGCAATCATCTCTGTTAAGCCTACCCAAGAAACATCTTGGAACCATGAAGCATACTTGTTATTTCCAGTTCATTTGGATGGAACGTTGCTAGACAATGCCAAAACCATGAAAGCCAAGAAGGAGTTCTACTCTACCTCTGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTCGAGCACATGCACAGTTTAGATCCTCCATATGCGCATAATGATGTCAAACCTGGGAATGTTCTGATAACACATAGGAAAGGACGATCGCCTCTTGCCATACTGATGGATTTTGGCAGTTCTCAACCTGCCAAGAGGCAAATTCGCTCCCGACAAGAGGCATTACAGCTGCAGGAATGGGCTGCCGAACACTGCTCTGCTCCTTTCCGTGCTCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATTGATGAAAGAACTGATATATGGTCGCTGGGATGCACATTGTATGCGATAATGTATGGCGTATCTCCATTTGAATATGCACTAGGAGAATCTGGAGGAAGCCTGCAGTTGGCCATTGTAAATGCTCAGGTCAAATGGCCAGCTGGACCTAAGCCCCCATATCCAGAAGCTCTTCATCAGTTTGTGACATGGATGCTTCAGCCTCAGGCTGCTGTGAGGCCCCGAATAAATGATATCATTATCCACGTCGATAAGCTGATTGCAAAGTTCTCTCCTTGA 1041 0.4765 MGCSFSGLNALYDAVNGGGDVWINENRFRIVRQLGEGGFAFVYLVREVVADSSPSSAGGGLSKKLKDSSHVSEDGIYAMKKILIQNGEQLELVREEIRVSSLFSHRNLLPLLDHAIISVKPTQETSWNHEAYLLFPVHLDGTLLDNAKTMKAKKEFYSTSDVLQIFRQLCAGLEHMHSLDPPYAHNDVKPGNVLITHRKGRSPLAILMDFGSSQPAKRQIRSRQEALQLQEWAAEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQVKWPAGPKPPYPEALHQFVTWMLQPQAAVRPRINDIIIHVDKLIAKFSP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1406 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Prci9g1406 346 Gene3D Transferase(Phosphotransferase) domain 1 16 345 - -
Prci9g1406 346 SMART serkin_6 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1406 346 Pfam Protein kinase domain 67 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1406 346 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 344 - -
Prci9g1406 346 CDD STKc_16 27 342 - -
Prci9g1406 346 SUPERFAMILY Protein kinase-like (PK-like) 20 336 IPR011009 -
Prci9g1406 346 ProSiteProfiles Protein kinase domain profile. 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1406 Prci-Chr9 27374391 27379797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1406 33 336 EF-hand Containing Proteins AT4G04710 25.243 8.25e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Prci9g1406 Pkinase 5.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1406 K08856 - egr:104421163 635.18