Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1405 ATGGGGTGCTCGTTTTCTGGGTTGAATGCGCTATACGACGCCGTTAATGGAGGAGGGGATGTCTGGATCAATGAGAACCGATTCCGAATCGTCAGGCAGCTCGGGGAAGGTGGGTTCGCCTTCGTCTATTTGGTTAGGGAGGTGGTCGCTGACTCCTCTCCCTCCTCTGCTGGCGGTGGTCTCTCTAAGAAGCTTAAAGACTCCTCTCATGTATCTGAAGATGGAATTTATGCCATGAAAAAGATCCTCATTCAGAATGGTGAACAGTTGGAGTTGGTGAGGGAGGAGATCCGTGTCTCGTCACTGTTTAGTCATCGAAATCTGCTCCCGCTTCTTGATCATGCAATCATCTCTGTTAAGGTAATTTTCATTCGAGCAAATTTTATTGAGCCTACCCAAGAAACATCTTGGAACCATGAAGCATACTTGTTATTTCCAGTTCATTTGGATGGAACGTTGCTAGACAATGCCAAAACCATGAAAGCCAAGAAGGAGTTCTACTCTACCTCTGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTCGAGCACATGCACAGTTTAGATCCTCCATATGCGCATAATGATGTCAAACCTGGGAATGTTCTGATAACACATAGGAAAGGACGATCGCCTCTTGCCATACTGATGGATTTTGGCAGTTCTCAACCTGCCAAGAGGCAAATTCGCTCCCGACAAGAGGCATTACAGCTGCAGGAATGGGCTGCCGAACACTGCTCTGCTCCTTTCCGTGCTCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATTGATGAAAGAACTGATATATGGTCGCTGGGATGCACATTGTATGCGATAATGTATGGCGTATCTCCATTTGAATATGCACTAGGAGAATCTGGAGGAAGCCTGCAGTTGGCCATTGTAAATGCTCAGGTCAAATGGCCAGCTGGACCTAAGCCCCCATATCCAGAAGCTCTTCATCAGTTTGTGACATGGATGCTTCAGCCTCAGGCTGCTGTGAGGCCCCGAATAAATGATATCATTATCCACGTCGATAAGCTGATTGCAAAGTTCTCTCCTTGA 1071 0.4706 MGCSFSGLNALYDAVNGGGDVWINENRFRIVRQLGEGGFAFVYLVREVVADSSPSSAGGGLSKKLKDSSHVSEDGIYAMKKILIQNGEQLELVREEIRVSSLFSHRNLLPLLDHAIISVKVIFIRANFIEPTQETSWNHEAYLLFPVHLDGTLLDNAKTMKAKKEFYSTSDVLQIFRQLCAGLEHMHSLDPPYAHNDVKPGNVLITHRKGRSPLAILMDFGSSQPAKRQIRSRQEALQLQEWAAEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQVKWPAGPKPPYPEALHQFVTWMLQPQAAVRPRINDIIIHVDKLIAKFSP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1405 356 ProSiteProfiles Protein kinase domain profile. 28 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1405 356 Gene3D Phosphorylase Kinase; domain 1 13 125 - -
Prci9g1405 356 Pfam Protein kinase domain 67 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1405 356 CDD STKc_16 27 352 - -
Prci9g1405 356 Gene3D Transferase(Phosphotransferase) domain 1 149 354 - -
Prci9g1405 356 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 354 - -
Prci9g1405 356 SUPERFAMILY Protein kinase-like (PK-like) 20 346 IPR011009 -
Prci9g1405 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Prci9g1405 356 SMART serkin_6 28 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1405 Prci-Chr9 27374390 27379797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1405 33 346 EF-hand Containing Proteins AT4G04710 23.824 4.59e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Prci9g1405 Pkinase 3.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1405 K08856 - egr:104421163 627.476