Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1402 ATGGGGAGCGATAGTGAAGCCGAAAAGTCGGTGCAGAAGGAGAAGGAGAAGGAGAAGAAGAAAATGCTCGGTCTGTCTCCAATTGCCAAGCCTCTGGCTGGGAAGAAGCTCTGCAAGCGAGCTCTTAAACTTGTTCGTCGAGCTTCTGAGCACAAGTGCCTAAAGAGAGGAGTAAAGGAGGTGGTTAAAAGTATAAGGCGTGGTCATAAAGGATTATGTGTTATTGCTGGCAATATATCACCAATTGATGTGATTACCCATCTTCCTATCTTATGAGAAGCTGAAATCCCATACATATACGTTCCATCGAAAGAAGACCTTGCAAGTGCAGGAGTGACCAAGAGGCCAACTTGCTGCGTTTTGGTGATGACCAAGCCTGCTAAGGGGGAATTAGATAAAGGGGAACAGGAAAAACTAGAGTCAGATTATGATCAAGTTGTATCAGAAGTTAATGAGGTTACTGCTTCTCTTTTTGAAGCACAAATTCATTTGTACTCTCTTTTGGTCAGTTAA 513 0.4327 MGSDSEAEKSVQKEKEKEKKKMLGLSPIAKPLAGKKLCKRALKLVRRASEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHLPILCXEAEIPYIYVPSKEDLASAGVTKRPTCCVLVMTKPAKGELDKGEQEKLESDYDQVVSEVNEVTASLFEAQIHLYSLLVS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1402 171 PRINTS High mobility group-like nuclear protein signature 27 40 IPR002415 GO:0003723|GO:0005730
Prci9g1402 171 PRINTS High mobility group-like nuclear protein signature 40 55 IPR002415 GO:0003723|GO:0005730
Prci9g1402 171 PRINTS High mobility group-like nuclear protein signature 101 113 IPR002415 GO:0003723|GO:0005730
Prci9g1402 171 PRINTS High mobility group-like nuclear protein signature 57 67 IPR002415 GO:0003723|GO:0005730
Prci9g1402 171 MobiDBLite consensus disorder prediction 1 21 - -
Prci9g1402 171 SUPERFAMILY L30e-like 23 133 IPR029064 -
Prci9g1402 171 Gene3D - 19 154 IPR029064 -
Prci9g1402 171 PRINTS Ribosomal protein L7A/RS6 family signature 73 86 IPR018492 -
Prci9g1402 171 PRINTS Ribosomal protein L7A/RS6 family signature 89 99 IPR018492 -
Prci9g1402 171 PRINTS Ribosomal protein L7A/RS6 family signature 99 113 IPR018492 -
Prci9g1402 171 PRINTS Ribosomal protein L7A/RS6 family signature 54 68 IPR018492 -
Prci9g1402 171 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 10 149 - -
Prci9g1402 171 FunFam H/ACA ribonucleoprotein complex subunit NHP2 22 154 - -
Prci9g1402 171 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 42 125 IPR004038 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1402 54 126 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 32.877 9.01e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1402 K11129 - gmx:100804186 262.307