Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1391 ATGGATTCGATGGACATCGTTGGGAAATCAAAGGAAGATGCTTCCCTTCCTAAAGCAACTATGACAAAAATTATTAAAGAGATGTTACCCCCTGATGTACGTGTTGCAAGAGATGCACAAGATCTATTGATTGAATGTTGTGTCGAGTTTATAAACCTTGTTTCATCGGAGTCCAATGATGTCTGTAATAGAGAGGATAAAAGGACAATTGCACCAGAGCATGTATTGAAGGCTTTACAGGTTCTTGGATTCAGTGAGTACATTGAGGAAGTTTATGCAGCATATGAGCAGCATAGGATTGAGACCAATGACTCTTTAAGGGCTGGCAAGTGGAGCAATGGAGCTGAGATGACTGAGGAGGAAGCATTGCTGGAGCAGCAAAGGATGTTTGCAGAGGCGCGTGCTAGAATGAATGGTGGGGCCATTGCTTCCAAGCAGCCGGATGCTGGCCAAACTTTAGATAGCTAA 468 0.4359 MDSMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNREDKRTIAPEHVLKALQVLGFSEYIEEVYAAYEQHRIETNDSLRAGKWSNGAEMTEEEALLEQQRMFAEARARMNGGAIASKQPDAGQTLDS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1391 155 Gene3D Histone, subunit A 4 142 IPR009072 GO:0046982
Prci9g1391 155 PANTHER PROTEIN DR1 HOMOLOG 1 154 IPR044255 -
Prci9g1391 155 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Prci9g1391 155 SUPERFAMILY Histone-fold 12 142 IPR009072 GO:0046982
Prci9g1391 155 FunFam Negative cofactor 2 beta 6 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1391 Prci-Chr9 27281677 27285647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1391 1 152 CCAAT-DR1 Transcription Factor Family AT5G23090 83.660 1.39e-91 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Prci9g1391 CBFD_NFYB_HMF 7.6e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1391 K21751 - gmx:100807912 278.485