Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1385 ATGGCCATAAGAATTCTAGTACATGTTCTTCTTCCGGCATTCCTCAGTTTTTATACGTGCAAAGGCCAAGACACTTCAGTATCACCACTATCACCAATGAAGAAGAAAGAACAAGAAACCCTGTATTCTGTTATACAAGGGTTTATAGGAAAAGGGTGGAACGGATCAGATCTTTATCCAGACCCTTGTGGGTGGACTCCCATACAGGGAGTTTCCTGCGAGCTGTATGAAAAGTACTGGTATGTGACTGTTTTGAACCTTGGGCCAGTTTTTGACAACTCCCTCGTCTGCACCCATGATGCTCAATTTCCAGATGAAATTTTCAAGCTCAAACACTTGAGGATCCTCTCCCTGACTGGCTGTTTCCTTTATCCTACCCAAAATCCAGTCAGATTACCCATTTCAAACTGGGAAAACCTCTCAAACAGCTTGGAATCTTTACACTTGAGGTCAAATCCGGGTCTGGTTGGTACTATTCCATCCTCATTTGGCTGCCTTAGGAAGCTCCAATCTCTTGCGCTGATAGAAAATGGACTGATAGGTGAGCTGCCATCGAGTATCGGTAATTTGGTCAGATTGAGACAACTAGTCCTTTCAGGAAACCATTTTGTGGGAGAAATTCCACTTCATTATATGGGTCTCTTCGAGCTTCTGATATTTGATGCAAGCAGGAATAACCTTTCAGGGGCATTGCCATCAACAGTCGGGCTTTTGGATTCCCTTCTAAAACTGGATTTGAGCAACAACTTGCTAGAGGGAGAGTTGCCAAGAGAGCTGGGAAGGCTTAAGAATCTTGTACTTCTAGATTTGAGTCATAACAAATTTAGAGGTGGATTGACTGGGCCACTTCAAGAACTGGTTTCTTTGCAGCACATGGTAATGTCACACAATCCAATAAGAGGTGATCTATTTGGTATTCAGTGGGAATTTTTCCAAAATATGGAAACTTTGGACTTTTCTGACATGAGTTTGACAGGGAGTGTACCGGAGTCCATGACAAAAATGAAAAGGCTAAGATATCTGGATCTAAGTAACAATAATCTCTCAGGATGTCTCTCCGTAAGTCTGGAAAATATGCCTTCTCTTAGAGCTCTTCACCTGAATGGAAATAAATTCACAGGAAAACTTGAATTCTCAGAAAGGTTTTACAGGAAAATGGGAAGGCGTTTTACAGCCTGGGACAATGCCAATGACCTGTGTTATATTGCCAGCTCAATGACGGCTTGGATCCAAGTGCCTTATGGAATTGTAGTTGGTGGCGACGTTGGCTGGACTGTTCCAAAGGATCAAGACTTCTTCGACGATTGGGCTTCCAGGAATAGATTCCTCGTCAATGATACCCTTCGTTTCGAGTACAAGACAGACTCGGTGATAGAAGTGAATGAAGAAGACTACAACAAATGCAAGGCGATGCGTCCTCTATTCTTCTCCAACAATGGGGACACGGTGTTCACATTTGACAGGCCTGGCTTGTTCTTCTTCATCAGTGGCGTTTCTGGTCACTGTGGTCGTGGCCAAAAGATCGTCGTCAAGGTCTTGGACTCCCACTCGCCCCCGCCCCAACATCAAAACGACGACCAGCACAGTGGAGCTGCTGTTATTGCTCCCCTCGCCAAAACGACATCGGTTCTGCTCGTTGTGTCGTCGTTCTTCCTTCTGCTCTTTGCAGCTTGA 1674 0.445 MAIRILVHVLLPAFLSFYTCKGQDTSVSPLSPMKKKEQETLYSVIQGFIGKGWNGSDLYPDPCGWTPIQGVSCELYEKYWYVTVLNLGPVFDNSLVCTHDAQFPDEIFKLKHLRILSLTGCFLYPTQNPVRLPISNWENLSNSLESLHLRSNPGLVGTIPSSFGCLRKLQSLALIENGLIGELPSSIGNLVRLRQLVLSGNHFVGEIPLHYMGLFELLIFDASRNNLSGALPSTVGLLDSLLKLDLSNNLLEGELPRELGRLKNLVLLDLSHNKFRGGLTGPLQELVSLQHMVMSHNPIRGDLFGIQWEFFQNMETLDFSDMSLTGSVPESMTKMKRLRYLDLSNNNLSGCLSVSLENMPSLRALHLNGNKFTGKLEFSERFYRKMGRRFTAWDNANDLCYIASSMTAWIQVPYGIVVGGDVGWTVPKDQDFFDDWASRNRFLVNDTLRFEYKTDSVIEVNEEDYNKCKAMRPLFFSNNGDTVFTFDRPGLFFFISGVSGHCGRGQKIVVKVLDSHSPPPQHQNDDQHSGAAVIAPLAKTTSVLLVVSSFFLLLFAA 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1385 557 Pfam Plastocyanin-like domain 424 506 IPR003245 GO:0009055
Prci9g1385 557 Gene3D - 415 517 IPR008972 -
Prci9g1385 557 PRINTS Leucine-rich repeat signature 241 254 - -
Prci9g1385 557 PRINTS Leucine-rich repeat signature 335 348 - -
Prci9g1385 557 FunFam Piriformospora indica-insensitive protein 2 36 207 - -
Prci9g1385 557 SUPERFAMILY Cupredoxins 416 513 IPR008972 -
Prci9g1385 557 FunFam Early nodulin-like protein 1 414 517 - -
Prci9g1385 557 Pfam Leucine rich repeat 313 372 IPR001611 GO:0005515
Prci9g1385 557 Pfam Leucine rich repeat 143 203 IPR001611 GO:0005515
Prci9g1385 557 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 103 416 - -
Prci9g1385 557 FunFam Piriformospora indica-insensitive protein 2 208 304 - -
Prci9g1385 557 Gene3D Ribonuclease Inhibitor 34 212 IPR032675 -
Prci9g1385 557 Gene3D Ribonuclease Inhibitor 307 400 IPR032675 -
Prci9g1385 557 SUPERFAMILY L domain-like 67 377 - -
Prci9g1385 557 Gene3D Ribonuclease Inhibitor 213 306 IPR032675 -
Prci9g1385 557 ProSiteProfiles Phytocyanin domain profile. 414 514 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1385 Prci-Chr9 27255149 27261562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1385 418 513 Phytocyanin Superfamily AT3G18590 63.636 7.12e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1385 - - gsj:114411748 686.026