Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1375 ATGAACAAAAAGCAGCCACAGTTAAATCTGATTATTCTCAGACTTCTTGAAATTTTGAAAGAACCCACCATGTCATCACCAAGTGGAATCGTTTGGAGCTATGAAGAAGAAAAGGCGTTTGAGAATGCCATCGCAATGCATTGGGATGAAGAAGACTCAACAGAACAATGGGAGGAGATTGCTTCAGCTGTTCCCAGCAAAAGCATGGAGGAATTGAAGCAACATTACCAATGGTTATTAGAAGATGTAAGTGCAATAGAGGCAGGCAATATTCCACTTCCCAACTATACTGGTGTGGAAGAAGCCACTTCTTCAAGTAAGGAATTGCATGCTTCTTCTTCCAAGGCTTCCACCTCAGAAAAGAAATCCAATTGCAATTTCAGAACTGGGTTTTCTGGGTTGGGACATGACTCATCTGGCCATACTGGTAAAGGAGGTTCTTCAAGATCTTCAGAACAAGAAAGGCGAAAAGGGATTCCCTGGACAGAAGAAGAGCATAGGCTATTTCTACTTGGTCTTGATAAATTTGGAAAGGGAGATTGGAGGAGCATATCAAGGAACTTTGTGATGTCAAGAACCCCAACTCAAGTGGCAAGCCATGCACAGAAGTACTTCATTAGGCTGAACTCCATGAACAGAGATAGGAGGAGGTCAAGCATCCATGACATAACAAGTGTGAACAATGGGGATGTGGCCACTAACCAGGCACCAATAACAGGGCAGCACACAAACACAAACCCATCAAGCACAATGGGTGCAGGACAATCTGCAAAGCATAGGGCTCATCAACCCCATATAGCTGCAGGTATAGGGATGTATGGAGCACCAGTAGGGCACCCGGTGGCTGCTCCTCCAGGGCATATGCCTTCGGCTGTAGGGACTCCTGTCCTGATGCCTCCTGGACCCCATCCTCATCCTCATCCTCCTTATGTTGTTCCAATGGCTTACCCTATGGCATCTCCAACAATGCACAGATGA 978 0.4571 MNKKQPQLNLIILRLLEILKEPTMSSPSGIVWSYEEEKAFENAIAMHWDEEDSTEQWEEIASAVPSKSMEELKQHYQWLLEDVSAIEAGNIPLPNYTGVEEATSSSKELHASSSKASTSEKKSNCNFRTGFSGLGHDSSGHTGKGGSSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVMSRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVATNQAPITGQHTNTNPSSTMGAGQSAKHRAHQPHIAAGIGMYGAPVGHPVAAPPGHMPSAVGTPVLMPPGPHPHPHPPYVVPMAYPMASPTMHR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1375 325 ProSiteProfiles Myb-like domain profile. 32 80 IPR001005 -
Prci9g1375 325 FunFam Transcription factor SRM1 24 93 - -
Prci9g1375 325 Gene3D - 159 211 - -
Prci9g1375 325 SUPERFAMILY Homeodomain-like 155 210 IPR009057 -
Prci9g1375 325 SUPERFAMILY Homeodomain-like 31 85 IPR009057 -
Prci9g1375 325 CDD SANT 32 77 IPR001005 -
Prci9g1375 325 Pfam Myb-like DNA-binding domain 160 205 IPR001005 -
Prci9g1375 325 PANTHER TRANSCRIPTION FACTOR KUA1 30 320 - -
Prci9g1375 325 SMART sant 28 82 IPR001005 -
Prci9g1375 325 SMART sant 157 207 IPR001005 -
Prci9g1375 325 MobiDBLite consensus disorder prediction 102 160 - -
Prci9g1375 325 Gene3D - 25 93 - -
Prci9g1375 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 153 209 IPR017930 -
Prci9g1375 325 NCBIfam myb-like DNA-binding domain, SHAQKYF class 157 207 IPR006447 GO:0003677
Prci9g1375 325 MobiDBLite consensus disorder prediction 102 147 - -
Prci9g1375 325 ProSiteProfiles Myb-like domain profile. 153 205 IPR001005 -
Prci9g1375 325 MobiDBLite consensus disorder prediction 227 255 - -
Prci9g1375 325 CDD SANT 160 205 IPR001005 -
Prci9g1375 325 FunFam transcription factor MYB1R1 159 210 - -
Prci9g1375 325 ProSiteProfiles SANT domain profile. 161 209 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1375 Prci-Chr9 27165747 27170166 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci9g1375 Myb_DNA-binding 1.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1375 - - pcin:129320426 587.8