Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1374 ATGTCATCACCAAGTGGAATCGTTTGGAGCTATGAAGAAGAAAAGGCGTTTGAGAATGCCATCGCAATGCATTGGGATGAAGAAGACTCAACAGAACAATGGGAGGAGATTGCTTCAGCTGTTCCCAGCAAAAGCATGGAGGAATTGAAGCAACATTACCAATGGTTATTAGAAGATGTAAGTGCAATAGAGGCAGGCAATATTCCACTTCCCAACTATACTGGTGTGGAAGAAGCCACTTCTTCAAGTAAGGAATTGCATGCTTCTTCTTCCAAGGCTTCCACCTCAGAAAAGAAATCCAATTGCAATTTCAGAACTGGGTTTTCTGGGTTGGGACATGACTCATCTGGCCATACTGGTAAAGGAGGTTCTTCAAGATCTTCAGAACAAGAAAGGCGAAAAGGGATTCCCTGGACAGAAGAAGAGCATAGGCTATTTCTACTTGGTCTTGATAAATTTGGAAAGGGAGATTGGAGGAGCATATCAAGGAACTTTGTGATGTCAAGAACCCCAACTCAAGTGGCAAGCCATGCACAGAAGTACTTCATTAGGCTGAACTCCATGAACAGAGATAGGAGGAGGTCAAGCATCCATGACATAACAAGTGTGAACAATGGGGATGTGGCCACTAACCAGGCACCAATAACAGGGCAGCACACAAACACAAACCCATCAAGCACAATGGGTGCAGGACAATCTGCAAAGCATAGGGCTCATCAACCCCATATAGCTGCAGGTATAGGGATGTATGGAGCACCAGTAGGGCACCCGGTGGCTGCTCCTCCAGGGCATATGCCTTCGGCTGTAGGGACTCCTGTCCTGATGCCTCCTGGACCCCATCCTCATCCTCATCCTCCTTATGTTGTTCCAATGGCTTACCCTATGGCATCTCCAACAATGCACAGATGA 909 0.4653 MSSPSGIVWSYEEEKAFENAIAMHWDEEDSTEQWEEIASAVPSKSMEELKQHYQWLLEDVSAIEAGNIPLPNYTGVEEATSSSKELHASSSKASTSEKKSNCNFRTGFSGLGHDSSGHTGKGGSSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVMSRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVATNQAPITGQHTNTNPSSTMGAGQSAKHRAHQPHIAAGIGMYGAPVGHPVAAPPGHMPSAVGTPVLMPPGPHPHPHPPYVVPMAYPMASPTMHR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1374 302 FunFam transcription factor MYB1R1 136 187 - -
Prci9g1374 302 CDD SANT 137 182 IPR001005 -
Prci9g1374 302 SUPERFAMILY Homeodomain-like 8 62 IPR009057 -
Prci9g1374 302 ProSiteProfiles SANT domain profile. 138 186 IPR017884 -
Prci9g1374 302 Gene3D - 3 70 - -
Prci9g1374 302 ProSiteProfiles Myb-like domain profile. 130 182 IPR001005 -
Prci9g1374 302 MobiDBLite consensus disorder prediction 204 232 - -
Prci9g1374 302 SUPERFAMILY Homeodomain-like 132 187 IPR009057 -
Prci9g1374 302 Gene3D - 136 188 - -
Prci9g1374 302 SMART sant 5 59 IPR001005 -
Prci9g1374 302 SMART sant 134 184 IPR001005 -
Prci9g1374 302 MobiDBLite consensus disorder prediction 79 137 - -
Prci9g1374 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 186 IPR017930 -
Prci9g1374 302 NCBIfam myb-like DNA-binding domain, SHAQKYF class 134 184 IPR006447 GO:0003677
Prci9g1374 302 FunFam Transcription factor SRM1 1 70 - -
Prci9g1374 302 MobiDBLite consensus disorder prediction 79 124 - -
Prci9g1374 302 PANTHER TRANSCRIPTION FACTOR KUA1 7 297 - -
Prci9g1374 302 ProSiteProfiles Myb-like domain profile. 9 57 IPR001005 -
Prci9g1374 302 Pfam Myb-like DNA-binding domain 137 182 IPR001005 -
Prci9g1374 302 CDD SANT 9 54 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1374 Prci-Chr9 27165747 27170316 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci9g1374 Myb_DNA-binding 1.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1374 - - pcin:129320426 559.296