Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1355 ATGGCAGACCTTTTTCGCGATTGGCGTTTGATGATTGTCTTCTTCGTCTCGCTTCTGATACTGAGTGTGCGAGTCAGTACGGAGCCGACTCGGGACAAGCAAGCCCTCCTTGCCTTCATCTCTCAGACCCCACACGCGAATCGGGTCCAATGGAACGCTTCCGACTCCGCCTGCAACTGGTTTGGGGTCCAATGCGACTCTTCTCGTTCCTTCGTCTTTTCTCTCCGTCTTCCAGGCGTCGGCCTTTTGGGCGGGATTCCTCCCAACACAATCGGTCGTCTCACTCAGCTACGAGTCCTCAGTCTCCGCTCGAATGCTCTCGACGGCGAGATCCCCGCCGATTTCTCCAATTTGACGTTGCTCCGTAACGTTTACCTCCAGGACAACCAGCTCTCCGGTGAGTTTCCTACGTCTCTGACTCAGTTGGGTCGTTTGACGCGCTTGGATCTCTCGTCCAACAACTTTACGGGTCCAATCCCTTTCTCAATCAACAACTTGACCCACTTGACCGGTCTATTTTTGCAAAACAATAGATTCTCGGGCAATCTACCCAGCATAAGTGCCAAATTGGTTGGCTTCAACGTTTCTTATAATCAGCTTAATGGTTCGATCCCCAAGTCTCTCTCCAATTTCCCTGCATCCTCATTTGCCGGAAACTTAGATCTCTGCGGAGGACCATTGTCGCCATGCACCCCATTCTTCCCGTCTCCGTCCCCGTCGCCTTCCGCCCCCGTCGTGCCCTCTTCCCCTGCTCAGAAAAAGTCCAAGAAGCTCTCAAAAGGCGCCATTATCGCAATCGCAGTCGGGTGTTCTGCCGCGGCCCTGCTACTCCTCCTACTGCTTCTGCTGCTATGCCTTGGGAAACGCCGCAGAAGCCAGCCAGCGAAATCGCCAAAGCCCGTGGCTGCGACACGTGCCGTGCCGGCTGAGGCTGGAACATCGTCCTCAAAAGACGACATCACCGGCGGGTCCGTGGAGGCGGAGAGGAACAAGCTGGTGTTCTTCGAAGGCGGGATATACAGCTTCGATTTGGAAGATCTGCTGAGAGCTTCCGCTGAAGTTCTGGGCAAAGGAAGCGTGGGAACATCCTACAAGGCCGTGCTGGAAGAAGGAACCACGGTGGTGGTGAAGAGATTAAAAGACGTGGCCGTAACAAAGAAAGACTTCGATGCTCAGATGGAGGTTCTGGGCAAGATTAAGCACGATAATGTGGTTCCTCTCAGAGCTTACTATTACTCCAAAGACGAGAAATTGCTCGTCTACGATTACCTCGCATCCGGCAGCCTGTCTGCTCTGCTTCACGGGAGCAGAGGGTCAGGGAGGACGCCCCTTGACTGGGATGGCCGAATGAGAATAGCGCTGGGTGCCGCCAGGGGGTTGCTTCACCTACACGTGTCAGGAAAAGTGGTCCACGGCAACATAAAAGCCTCCAACATCCTCCTCCACGACAACGAAGCCTGCGTTTCGGACTTCGGCCTCAACCCGTTGTTCGCCAACACCACTCCTTCCAACCGGGTCGCGGGCTACCGGGCCCCCGAGGTCGTGGAGACCCGGAAGGTCACCTTCAAATCCGACGTGTACAGTCTTGGCGTGTTGCTGCTGGAGCTCCTCACCGGGAAGGCGCCGAACCAGGCGTCGCTGGGCGAGGAGGGGATCGACCTCCCGAGATGGGTCCAGTCGGTGGTCCGGGAAGAATGGACGGCGGAGGTGTTCGACGCGGAGCTCATGAGGTACCACAATATAGAGGAAGAGATGGTTCAGTTGTTGCAGATAGCCATGGCGTGCGTGTCGGTGGTTCCCGATCAGAGACCCGCGATGCAGGAGGTGGTTCGGATGATGGAGGAGATCAACAGGAGCGAGACCGACGAGGGGTTGCGGCAGTCGTCGGACGATCCGTCGAAGGGATCGGACGGTCAAACGCCGCCGGCGGAGTCGAGGACTCCGCCGAGATCAATCACGCCATGA 1965 0.5654 MADLFRDWRLMIVFFVSLLILSVRVSTEPTRDKQALLAFISQTPHANRVQWNASDSACNWFGVQCDSSRSFVFSLRLPGVGLLGGIPPNTIGRLTQLRVLSLRSNALDGEIPADFSNLTLLRNVYLQDNQLSGEFPTSLTQLGRLTRLDLSSNNFTGPIPFSINNLTHLTGLFLQNNRFSGNLPSISAKLVGFNVSYNQLNGSIPKSLSNFPASSFAGNLDLCGGPLSPCTPFFPSPSPSPSAPVVPSSPAQKKSKKLSKGAIIAIAVGCSAAALLLLLLLLLLCLGKRRRSQPAKSPKPVAATRAVPAEAGTSSSKDDITGGSVEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVAVTKKDFDAQMEVLGKIKHDNVVPLRAYYYSKDEKLLVYDYLASGSLSALLHGSRGSGRTPLDWDGRMRIALGAARGLLHLHVSGKVVHGNIKASNILLHDNEACVSDFGLNPLFANTTPSNRVAGYRAPEVVETRKVTFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVSVVPDQRPAMQEVVRMMEEINRSETDEGLRQSSDDPSKGSDGQTPPAESRTPPRSITP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1355 654 PANTHER OS05G0588300 PROTEIN 13 626 - -
Prci9g1355 654 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 424 627 - -
Prci9g1355 654 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Prci9g1355 654 FunFam pollen receptor-like kinase 1 319 423 - -
Prci9g1355 654 SUPERFAMILY Protein kinase-like (PK-like) 353 614 IPR011009 -
Prci9g1355 654 Gene3D Transferase(Phosphotransferase) domain 1 424 636 - -
Prci9g1355 654 SUPERFAMILY L domain-like 35 226 - -
Prci9g1355 654 Gene3D Phosphorylase Kinase; domain 1 317 423 - -
Prci9g1355 654 MobiDBLite consensus disorder prediction 631 654 - -
Prci9g1355 654 MobiDBLite consensus disorder prediction 292 322 - -
Prci9g1355 654 ProSiteProfiles Protein kinase domain profile. 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1355 654 MobiDBLite consensus disorder prediction 615 654 - -
Prci9g1355 654 Pfam Leucine rich repeat 83 131 IPR001611 GO:0005515
Prci9g1355 654 FunFam Probable inactive receptor kinase RLK902 29 187 - -
Prci9g1355 654 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Prci9g1355 654 Gene3D Ribonuclease Inhibitor 188 233 IPR032675 -
Prci9g1355 654 Pfam Protein kinase domain 352 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1355 654 MobiDBLite consensus disorder prediction 615 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1355 Prci-Chr9 27074105 27077142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1355 10 637 Receptor kinase-like Gene Family AT5G58300 54.160 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci9g1355 Pkinase 6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1355 - - qsa:O6P43_023032 950.658