Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci9g1340 | ATGCTCAGAAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCCGTATGGAGTTGCTGCTTGGATACAAATGCTTTACGTGCTGCAACTGCCTCTGCTGATTTCTCATCGAAAGTTTGGGATGCATTAACAGGAGATGAATTACACTCGTTTGAGCATAAGCACATTGTTCGTGCATGTGCTTTTTCTGAGGATACACACCTTTTACTCACTGGAGGATTAGAGAAAATTCTCCGCATCTATGACTTGAATCGTCCCGATGCACCACCCAGAGAAGTTGAGAAGTCCTCTGGTTCTATCAGAACAGTTACATGGCTCCATAGTGACCAGACAATATTAAGTTCTTGTACCGATATGGGAGGTGTCAGGTTATGGGATATAAGAAGTGGTCAAATAGTCCAGACACTTGAGACCAAATCATCTGTGACTAGTACTGAAGTGAGCCGGGATGGTCGTTACATCATAACTGCAGATGGTTCTACTGTTAAATTTTGGGATGCAAATTACTACGAGTTGGTGAAGAGTTATGATATGCCTTGCACTGTTGAATCAGCCTCATTGGAACCTAAACATGGGAATAAATTCGTTGCTGGGGGAGAAGACATGTGGGTTCGTGTTTTTGACTTCCATACTGGCAATGACATTGCATGCAACAAAGGCCACCATGGTCCTGTGCACTGTGTGCGTTTCTCTCCTGGGGGTGAATCATATGCCTCAGGATCTGAGGACGGAACCATTAGAATATGGCAAACTGGCCCTTTGACCTATGATGAGTCAGAGTCTATGTCTGCAAATGGATCACTTGCAAAGGTGAAGGTTGACGCAGACGAGGTTTCTTGCAAGATTGAGGGCTTGCATATTGCAGAGGAGGGGAAATCCGAGGAAAAGATAGAGGCGGGGGACGAATAA | 924 | 0.4491 | MLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATASADFSSKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGLEKILRIYDLNRPDAPPREVEKSSGSIRTVTWLHSDQTILSSCTDMGGVRLWDIRSGQIVQTLETKSSVTSTEVSRDGRYIITADGSTVKFWDANYYELVKSYDMPCTVESASLEPKHGNKFVAGGEDMWVRVFDFHTGNDIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTYDESESMSANGSLAKVKVDADEVSCKIEGLHIAEEGKSEEKIEAGDE | 307 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci9g1340 | 307 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I | 1 | 298 | - | - | |
Prci9g1340 | 307 | Gene3D | - | 1 | 279 | IPR015943 | GO:0005515 | |
Prci9g1340 | 307 | Pfam | WD domain, G-beta repeat | 224 | 254 | IPR001680 | GO:0005515 | |
Prci9g1340 | 307 | Pfam | WD domain, G-beta repeat | 51 | 87 | IPR001680 | GO:0005515 | |
Prci9g1340 | 307 | Pfam | WD domain, G-beta repeat | 11 | 46 | IPR001680 | GO:0005515 | |
Prci9g1340 | 307 | Pfam | WD domain, G-beta repeat | 135 | 171 | IPR001680 | GO:0005515 | |
Prci9g1340 | 307 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 223 | 255 | - | - | |
Prci9g1340 | 307 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 14 | 55 | IPR001680 | GO:0005515 | |
Prci9g1340 | 307 | CDD | WD40 | 11 | 256 | - | - | |
Prci9g1340 | 307 | SUPERFAMILY | WD40 repeat-like | 3 | 255 | IPR036322 | GO:0005515 | |
Prci9g1340 | 307 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 55 | 89 | IPR001680 | GO:0005515 | |
Prci9g1340 | 307 | SMART | WD40_4 | 91 | 131 | IPR001680 | GO:0005515 | |
Prci9g1340 | 307 | SMART | WD40_4 | 7 | 46 | IPR001680 | GO:0005515 | |
Prci9g1340 | 307 | SMART | WD40_4 | 216 | 255 | IPR001680 | GO:0005515 | |
Prci9g1340 | 307 | SMART | WD40_4 | 174 | 213 | IPR001680 | GO:0005515 | |
Prci9g1340 | 307 | SMART | WD40_4 | 134 | 171 | IPR001680 | GO:0005515 | |
Prci9g1340 | 307 | SMART | WD40_4 | 49 | 87 | IPR001680 | GO:0005515 | |
Prci9g1340 | 307 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 223 | 255 | IPR001680 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci9g1340 | Prci-Chr9 | 26983734 | 26987490 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci9g1340 | 6 | 253 | Eukaryotic Initiation Factors Gene Family | AT2G46290 | 27.273 | 2.57e-30 | 115 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci9g1340 | K13137 | - | gmx:100818422 | 568.155 |