Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1337 ATGCATGCCTTCACGTTGTGGGAGAACTTTCTGATTATTCTGGTGGGGTACACTGCATGGGTATCGCCATTTGAGTTCGGATTTCTTGAAAAGCCAGTAGGGTTTCTCTCGATCACGGACAATGTTGCGAATGGGCTCTTCGCTGTGGATATAGTTCTCACGTTCTTCGTCGCTTACATTGACAAAGTCACCTACCTCTTGGTTGAAGACCGAAGAACCATTGCCGTGAGATATCTCAAGACTTGGTTCGTCCTCGATGTCATCTCCATTATCCCTTCGGAGCTCGCTCGCAAGGTTCCCATCTCGCCATTTGAGTCCTATGGACCTTTCAACATGCTTCGCCTCTGGCGCATTCGAAGAGTTAGTGCCTTGTTTGCTAGACTGGAGAAGGACATAAACTATAACTATTTCCTGGTTCGGTGTGCTAAGCTTATCTGTGTTACCATTTTTGCTGTTCACTTAGCTGGATGCTTCTTCTATTATATTGCTGCACATTATCCTGATCCTAAGCAGACTTGGATCGGGCTATCATTGGAAGACTTCCATCAAGAGAGCTTGTATACAAAATATGTGTATTCCATGTACTGGTCTATCACTACTTTAGCAACTGTTGGCTATGGCGATTTGCATCCAGTTAATGCGTCAGAGATGGTCTTTGACATCTTTTACATGTTCTTCAATCTGGGTTTAACGTCATATTTGATTGGTAATATGACCAACTTGGTTGTCAATGGCACAAGTCGAACCAGTAGATTTAGGGATACCATACAAGCTGCCTCAAATTTTGCGGAAAGGAACCATTTGCCTGCTCGTCTGAAAGATCAGATGCTTGAACACATGTGCTTGAGGTTCAGAACAGACTCAGAGGGGTTGCAGCATCACGAGAGCCTCGATACTCTTCCCAAGGCCATCAGATCAAGCATCTCACGCAATCTTTTTTACTCTGTGGTGGATGATGTCTACTTGTTTTCTGGGGTTTCAAGAAACTTGCTTTTTCAACTGGTAACAGAGATGAAAGCAGAGTATTTCCCCCCAAAAGAAGACGTTATCTTGCAGAACGAAGAACCAACTGATCTTTATATTATAGTCACCGGTGCTGTGGACCTGCTAGTTATGAAAAATGGAGCCGAAGAGCTCGTAGGCGAGGCAAAAGATGGTGATGCTTTTGGCGAGATTGGAGTGCTTTGCTATAGGCTACAACCCTTCACTGTTCGAACCAAGCGATTGAGCCAGCTACTGAGGCTTAACCGCACCGTATTTTTAAATGCTATTCAAGCCAACGTGGGAGATGGGAACTTAATCATGAATAATCTCCTTCAGCATTTGAAAGAACTTAAGGACCCATTTATGGACGGAATTCTAGTGACTACAGAGAACTTGCTAGCTAGTGGTCGGGTGAACCTACCACTTAGTCTTTCCTTTGCCGCACTAAGAGGAGATGACTGGCTGTTGCATCAGTTGTTGAATCGGGGCTTGGATCCAAATGAATCTGACAACAAAGGAAGGACTGCTTTGCATATAGCAGCATCCAAAGGAAGTTTGGACCATGTCATTCTTCTTTTGGAACATGGCGCATATCCAAACATTAGAGATTATGATGGCAGTGTCCCTCTATGGGAGGCTGTAGTGGGCAGACACGAGTCTGTGAGCAAGCTGTTGGTAGAAAATGGCGCAAACTTAGAATGTGGAGATGTGGGTCAATTTGCATGCATTGCCGCTGAACAGAATAATCTGAGCTTGCTCAAAGATATAGTGAGACATGGAGGAGATGTAGCACTTTCTAGGAATTATGATGGGACCACAGCATTACATATTGCAGTCTGTGAAGGCAGTGTAGAGATTGTGAAGTTCCTTTTGGATCAAGGGGCTGACGTTGACAAACCAGACAAGCATGGCTGGAAACCAAGAGCTCTGGCAGATCAACAGGGACATGAGGAAATCAAGGCTATTTTTCAGACTATCGTGGAGCCTAAGGCTCCAACTCCTGTCACTGCAACTCCTGAGAGGTCTGTTGGAAGGCTTGCAAGAATTGGGAAGAACACTGGAAATTTCCAACCTAGGGTAACAATCAGTTGCCCTGAAAAGGTCGAAATTGCAGGAAAAATTGTGCTTCTACCAGGGAGCTTTAAGGAGCTACTTGAGATTGGAGCTAATAAATTTGGTATCACCCCTGCTAGGATACTGAGCAGAGATGAAGCTGAAATTGATGATCTAGATGTGATTAGAGATGGTGATCACCTTTTGTTTGTCAGTTCTGAAAAGATCTCTAAAGCCGGTTCCCCTAATGGCTGA 2292 0.4446 MHAFTLWENFLIILVGYTAWVSPFEFGFLEKPVGFLSITDNVANGLFAVDIVLTFFVAYIDKVTYLLVEDRRTIAVRYLKTWFVLDVISIIPSELARKVPISPFESYGPFNMLRLWRIRRVSALFARLEKDINYNYFLVRCAKLICVTIFAVHLAGCFFYYIAAHYPDPKQTWIGLSLEDFHQESLYTKYVYSMYWSITTLATVGYGDLHPVNASEMVFDIFYMFFNLGLTSYLIGNMTNLVVNGTSRTSRFRDTIQAASNFAERNHLPARLKDQMLEHMCLRFRTDSEGLQHHESLDTLPKAIRSSISRNLFYSVVDDVYLFSGVSRNLLFQLVTEMKAEYFPPKEDVILQNEEPTDLYIIVTGAVDLLVMKNGAEELVGEAKDGDAFGEIGVLCYRLQPFTVRTKRLSQLLRLNRTVFLNAIQANVGDGNLIMNNLLQHLKELKDPFMDGILVTTENLLASGRVNLPLSLSFAALRGDDWLLHQLLNRGLDPNESDNKGRTALHIAASKGSLDHVILLLEHGAYPNIRDYDGSVPLWEAVVGRHESVSKLLVENGANLECGDVGQFACIAAEQNNLSLLKDIVRHGGDVALSRNYDGTTALHIAVCEGSVEIVKFLLDQGADVDKPDKHGWKPRALADQQGHEEIKAIFQTIVEPKAPTPVTATPERSVGRLARIGKNTGNFQPRVTISCPEKVEIAGKIVLLPGSFKELLEIGANKFGITPARILSRDEAEIDDLDVIRDGDHLLFVSSEKISKAGSPNG 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1337 763 Gene3D - 469 653 IPR036770 -
Prci9g1337 763 SMART cnmp_10 322 439 IPR000595 -
Prci9g1337 763 ProSiteProfiles KHA domain profile. 687 763 IPR021789 -
Prci9g1337 763 PRINTS Ankyrin repeat signature 614 628 IPR002110 GO:0005515
Prci9g1337 763 PRINTS Ankyrin repeat signature 501 516 IPR002110 GO:0005515
Prci9g1337 763 PANTHER POTASSIUM CHANNEL AKT1 4 752 IPR045319 GO:0005249|GO:0006813
Prci9g1337 763 ProSiteProfiles Ankyrin repeat profile. 598 630 IPR002110 GO:0005515
Prci9g1337 763 SUPERFAMILY Voltage-gated potassium channels 5 243 - -
Prci9g1337 763 FunFam Potassium channel KAT3 6 244 - -
Prci9g1337 763 Pfam Ion transport protein 6 249 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci9g1337 763 Gene3D Jelly Rolls 286 447 IPR014710 -
Prci9g1337 763 ProSiteProfiles Ankyrin repeat profile. 533 565 IPR002110 GO:0005515
Prci9g1337 763 SMART ANK_2a 467 496 IPR002110 GO:0005515
Prci9g1337 763 SMART ANK_2a 533 562 IPR002110 GO:0005515
Prci9g1337 763 SMART ANK_2a 500 529 IPR002110 GO:0005515
Prci9g1337 763 SMART ANK_2a 598 627 IPR002110 GO:0005515
Prci9g1337 763 SMART ANK_2a 564 593 IPR002110 GO:0005515
Prci9g1337 763 CDD CAP_ED 322 427 IPR000595 -
Prci9g1337 763 Gene3D - 8 243 - -
Prci9g1337 763 FunFam Potassium channel KAT2 310 446 - -
Prci9g1337 763 SUPERFAMILY Ankyrin repeat 435 651 IPR036770 -
Prci9g1337 763 Pfam Cyclic nucleotide-binding domain 342 426 IPR000595 -
Prci9g1337 763 PRINTS EAG/ELK/ERG potassium channel family signature 17 24 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci9g1337 763 PRINTS EAG/ELK/ERG potassium channel family signature 234 243 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci9g1337 763 PRINTS EAG/ELK/ERG potassium channel family signature 190 207 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci9g1337 763 PRINTS EAG/ELK/ERG potassium channel family signature 51 60 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci9g1337 763 PRINTS EAG/ELK/ERG potassium channel family signature 216 227 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci9g1337 763 PRINTS EAG/ELK/ERG potassium channel family signature 40 50 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci9g1337 763 ProSiteProfiles Ankyrin repeat region circular profile. 598 630 - -
Prci9g1337 763 ProSiteProfiles Ankyrin repeat profile. 500 532 IPR002110 GO:0005515
Prci9g1337 763 ProSiteProfiles cAMP/cGMP binding motif profile. 322 441 IPR000595 -
Prci9g1337 763 Pfam Ankyrin repeats (3 copies) 472 562 IPR002110 GO:0005515
Prci9g1337 763 Pfam Ankyrin repeats (3 copies) 571 628 IPR002110 GO:0005515
Prci9g1337 763 SUPERFAMILY cAMP-binding domain-like 247 442 IPR018490 -
Prci9g1337 763 Pfam KHA, dimerisation domain of potassium ion channel 686 749 IPR021789 -
Prci9g1337 763 ProSiteProfiles Ankyrin repeat region circular profile. 500 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1337 Prci-Chr9 26964259 26968626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1337 53 751 Ion Channels AT2G26650 62.467 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1337 K21867 - rcu:8276225 1060.06