Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1336 ATGAAGAACCAGGCGGAGATAGAACTGCCAAGAGAAGCCAACTATTTAAGCCTCTCTACTGGTATATTGCCTTCACTCGGAGCCCCCCATGCACCCAGAAGGAGCCTCAAGACCTTCATTATCTCGCCTTATGACCGTCGTTACAGGTTGTGGGAGAACTTTCTGATTATTCTGGTGGGGTACACTGCATGGGTATCGCCATTTGAGTTCGGATTTCTTGAAAAGCCAGTAGGGTTTCTCTCGATCACGGACAATGTTGCGAATGGGCTCTTCGCTGTGGATATAGTTCTCACGTTCTTCGTCGCTTACATTGACAAAGTCACCTACCTCTTGGTTGAAGACCGAAGAACCATTGCCGTGAGATATCTCAAGACTTGGTTCGTCCTCGATGTCATCTCCATTATCCCTTCGGAGCTCGCTCGCAAGGTTCCCATCTCGCCATTTGAGTCCTATGGACCTTTCAACATGCTTCGCCTCTGGCGCATTCGAAGAGTTAGTGCCTTGTTTGCTAGACTGGAGAAGGACATAAACTATAACTATTTCCTGGTTCGGTGTGCTAAGCTTATCTGTGTTACCATTTTTGCTGTTCACTTAGCTGGATGCTTCTTCTATTATATTGCTGCACATTATCCTGATCCTAAGCAGACTTGGATCGGGCTATCATTGGAAGACTTCCATCAAGAGAGCTTGTATACAAAATATGTGTATTCCATGTACTGGTCTATCACTACTTTAGCAACTGTTGGCTATGGCGATTTGCATCCAGTTAATGCGTCAGAGATGGTCTTTGACATCTTTTACATGTTCTTCAATCTGGGTTTAACGTCATATTTGATTGGTAATATGACCAACTTGGTTGTCAATGGCACAAGTCGAACCAGTAGATTTAGGGATACCATACAAGCTGCCTCAAATTTTGCGGAAAGGAACCATTTGCCTGCTCGTCTGAAAGATCAGATGCTTGAACACATGTGCTTGAGGTTCAGAACAGACTCAGAGGGGTTGCAGCATCACGAGAGCCTCGATACTCTTCCCAAGGCCATCAGATCAAGCATCTCACGCAATCTTTTTTACTCTGTGGTGGATGATGTCTACTTGTTTTCTGGGGTTTCAAGAAACTTGCTTTTTCAACTGGTAACAGAGATGAAAGCAGAGTATTTCCCCCCAAAAGAAGACGTTATCTTGCAGAACGAAGAACCAACTGATCTTTATATTATAGTCACCGGTGCTGTGGACCTGCTAGTTATGAAAAATGGAGCCGAAGAGCTCGTAGGCGAGGCAAAAGATGGTGATGCTTTTGGCGAGATTGGAGTGCTTTGCTATAGGCTACAACCCTTCACTGTTCGAACCAAGCGATTGAGCCAGCTACTGAGGCTTAACCGCACCGTATTTTTAAATGCTATTCAAGCCAACGTGGGAGATGGGAACTTAATCATGAATAATCTCCTTCAGCATTTGAAAGAACTTAAGGACCCATTTATGGACGGAATTCTAGTGACTACAGAGAACTTGCTAGCTAGTGGTCGGGTGAACCTACCACTTAGTCTTTCCTTTGCCGCACTAAGAGGAGATGACTGGCTGTTGCATCAGTTGTTGAATCGGGGCTTGGATCCAAATGAATCTGACAACAAAGGAAGGACTGCTTTGCATATAGCAGCATCCAAAGGAAGTTTGGACCATGTCATTCTTCTTTTGGAACATGGCGCATATCCAAACATTAGAGATTATGATGGCAGTGTCCCTCTATGGGAGGCTGTAGTGGGCAGACACGAGTCTGTGAGCAAGCTGTTGGTAGAAAATGGCGCAAACTTAGAATGTGGAGATGTGGGTCAATTTGCATGCATTGCCGCTGAACAGAATAATCTGAGCTTGCTCAAAGATATAGTGAGACATGGAGGAGATGTAGCACTTTCTAGGAATTATGATGGGACCACAGCATTACATATTGCAGTCTGTGAAGGCAGTGTAGAGATTGTGAAGTTCCTTTTGGATCAAGGGGCTGACGTTGACAAACCAGACAAGCATGGCTGGAAACCAAGAGCTCTGGCAGATCAACAGGGACATGAGGAAATCAAGGCTATTTTTCAGACTATCGTGGAGCCTAAGGCTCCAACTCCTGTCACTGCAACTCCTGAGAGGTCTGTTGGAAGGCTTGCAAGAATTGGGAAGAACACTGGAAATTTCCAACCTAGGGTAACAATCAGTTGCCCTGAAAAGGTCGAAATTGCAGGAAAAATTGTGCTTCTACCAGGGAGCTTTAAGGAGCTACTTGAGATTGGAGCTAATAAATTTGGTATCACCCCTGCTAGGATACTGAGCAGAGATGAAGCTGAAATTGATGATCTAGATGTGATTAGAGATGGTGATCACCTTTTGTTTGTCAGTTCTGAAAAGATCTCTAAAGCCGGTTCCCCTAATGGCTGA 2424 0.4476 MKNQAEIELPREANYLSLSTGILPSLGAPHAPRRSLKTFIISPYDRRYRLWENFLIILVGYTAWVSPFEFGFLEKPVGFLSITDNVANGLFAVDIVLTFFVAYIDKVTYLLVEDRRTIAVRYLKTWFVLDVISIIPSELARKVPISPFESYGPFNMLRLWRIRRVSALFARLEKDINYNYFLVRCAKLICVTIFAVHLAGCFFYYIAAHYPDPKQTWIGLSLEDFHQESLYTKYVYSMYWSITTLATVGYGDLHPVNASEMVFDIFYMFFNLGLTSYLIGNMTNLVVNGTSRTSRFRDTIQAASNFAERNHLPARLKDQMLEHMCLRFRTDSEGLQHHESLDTLPKAIRSSISRNLFYSVVDDVYLFSGVSRNLLFQLVTEMKAEYFPPKEDVILQNEEPTDLYIIVTGAVDLLVMKNGAEELVGEAKDGDAFGEIGVLCYRLQPFTVRTKRLSQLLRLNRTVFLNAIQANVGDGNLIMNNLLQHLKELKDPFMDGILVTTENLLASGRVNLPLSLSFAALRGDDWLLHQLLNRGLDPNESDNKGRTALHIAASKGSLDHVILLLEHGAYPNIRDYDGSVPLWEAVVGRHESVSKLLVENGANLECGDVGQFACIAAEQNNLSLLKDIVRHGGDVALSRNYDGTTALHIAVCEGSVEIVKFLLDQGADVDKPDKHGWKPRALADQQGHEEIKAIFQTIVEPKAPTPVTATPERSVGRLARIGKNTGNFQPRVTISCPEKVEIAGKIVLLPGSFKELLEIGANKFGITPARILSRDEAEIDDLDVIRDGDHLLFVSSEKISKAGSPNG 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1336 807 ProSiteProfiles Ankyrin repeat profile. 642 674 IPR002110 GO:0005515
Prci9g1336 807 FunFam Potassium channel KAT3 50 288 - -
Prci9g1336 807 Pfam KHA, dimerisation domain of potassium ion channel 730 793 IPR021789 -
Prci9g1336 807 CDD CAP_ED 366 471 IPR000595 -
Prci9g1336 807 PRINTS EAG/ELK/ERG potassium channel family signature 234 251 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci9g1336 807 PRINTS EAG/ELK/ERG potassium channel family signature 260 271 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci9g1336 807 PRINTS EAG/ELK/ERG potassium channel family signature 278 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci9g1336 807 PRINTS EAG/ELK/ERG potassium channel family signature 61 68 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci9g1336 807 PRINTS EAG/ELK/ERG potassium channel family signature 95 104 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci9g1336 807 PRINTS EAG/ELK/ERG potassium channel family signature 84 94 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci9g1336 807 ProSiteProfiles cAMP/cGMP binding motif profile. 366 485 IPR000595 -
Prci9g1336 807 ProSiteProfiles KHA domain profile. 731 807 IPR021789 -
Prci9g1336 807 ProSiteProfiles Ankyrin repeat profile. 577 609 IPR002110 GO:0005515
Prci9g1336 807 Gene3D - 513 697 IPR036770 -
Prci9g1336 807 Pfam Ankyrin repeats (3 copies) 615 672 IPR002110 GO:0005515
Prci9g1336 807 Pfam Ankyrin repeats (3 copies) 516 606 IPR002110 GO:0005515
Prci9g1336 807 SUPERFAMILY Ankyrin repeat 479 695 IPR036770 -
Prci9g1336 807 SUPERFAMILY Voltage-gated potassium channels 43 287 - -
Prci9g1336 807 ProSiteProfiles Ankyrin repeat region circular profile. 544 575 - -
Prci9g1336 807 Gene3D Jelly Rolls 330 491 IPR014710 -
Prci9g1336 807 PANTHER POTASSIUM CHANNEL AKT1 17 796 IPR045319 GO:0005249|GO:0006813
Prci9g1336 807 SMART ANK_2a 642 671 IPR002110 GO:0005515
Prci9g1336 807 SMART ANK_2a 544 573 IPR002110 GO:0005515
Prci9g1336 807 SMART ANK_2a 577 606 IPR002110 GO:0005515
Prci9g1336 807 SMART ANK_2a 511 540 IPR002110 GO:0005515
Prci9g1336 807 SMART ANK_2a 608 637 IPR002110 GO:0005515
Prci9g1336 807 Pfam Ion transport protein 49 293 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci9g1336 807 SMART cnmp_10 366 483 IPR000595 -
Prci9g1336 807 Gene3D - 52 287 - -
Prci9g1336 807 PRINTS Ankyrin repeat signature 658 672 IPR002110 GO:0005515
Prci9g1336 807 PRINTS Ankyrin repeat signature 545 560 IPR002110 GO:0005515
Prci9g1336 807 ProSiteProfiles Ankyrin repeat region circular profile. 642 674 - -
Prci9g1336 807 FunFam Potassium channel KAT2 354 490 - -
Prci9g1336 807 Pfam Cyclic nucleotide-binding domain 386 470 IPR000595 -
Prci9g1336 807 SUPERFAMILY cAMP-binding domain-like 291 486 IPR018490 -
Prci9g1336 807 ProSiteProfiles Ankyrin repeat profile. 544 576 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1336 Prci-Chr9 26964064 26968626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1336 17 793 Ion Channels AT2G25600 58.214 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1336 K21867 - zju:107432387 1107.05