Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1320 ATGGCCACCACCAAGGCCATAGCCAGAGACGAATCCGATTATGATAGTAGCTGCTCCTCCCTCACCACCGTTCCAGAATCCAGCCGGAGCTGGATGACCAACCTCAGCTTCAGCAGCCGTCGCCGCAGCAGCTCCGTCTCCGTTTGTTCCTCCACCACCACAGATACCACCACCTCCTCCTCTCTGTCTCACGGCTCCCACGCCAAGCCTCACAAGGCCAACCAAGCAGCATGGGAGGCCATGTCCCGCCTTCGCCGCGACAGTAACGGCCAACTCGGCCTCCACCACTTCCGCCTTCTCCGGCGCCTCGGCGGCGGCGACATAGGCAACGTCTACCTCTGTCAGATCAGGAACCCCCTCGTTGTGGGGTCGAAACAGAGTCTCTACGCCATGAAAGTGGTTGACAGAGAAGCGCTTTCGGTGAGAAACAAGTTGCAGAGAGCTGAGATGGAGAAGGAGATTCTGGGCATGCTTGATCATCCATTTCTGCCCACTTTATATGCTGAGTTTGAGGCGTCTCATTACTCTTGCTTGGTCATGGAGTTCTGTCCCGGTGGAGATTTGTATGCTTCTCGCCAGCGTGAGCCAGGGAAGCGATTCAGCATTCAATCGGCCAAGTTTTATGCAGCTGAGACACTGTTGGCTTTGGAGTATCTTCACATGATGGGCATTGTGTATAGAGATTTGAAGCCAGAGAACGTGCTGGTGAGAGAGGATGGGCACATTATGCTCTCAGATTTTGATCTCTCTCTCAAATGCGACGTCGTTCCCAAGCTCTTGAGAAGTAAATCAAGTTTCAAGACGATTCCAAGGAGCTCTTCATCAACATCATCATCTCCTGCCTGCGCCGCCCCCATGCAATCATGTTTCTCATCAGCATCATTTCGCAGCAAGAGCAAGAGAGAAAGTAGAGTCATAACAATCATAAGAGAAAATGTTTCAGTCCAAAAAGAACAAGAAGAAAAAGATGACGAGGACGACATTGATGATAATGATGATGATGAACCTGAGCTAGTGGCAGAGCCTATCAATGCCAAGTCTATGTCATTTGTAGGGACTCATGAGTACCTAGCACCAGAGGTGATTTCAGGGCAAGGCCATGGGAGCGCAGTGGATTGGTGGACTTTTGGAGTGTTCTTGTATGAGATGTTATATGGAAGAACACCCTTCAAAGGTGAGAACAATGGGAAAACACTCATAAACATCCTGAAGCAGTCATTGGCTTTCCCCAGAATTGCAGCTAGCAGCAGCAAGGAGTATGAAGAGATGGTGAGAGTTCAAGACCTGATAAGCAAACTATTGGTGAAGAATCCCAAGAAGAGAATTGGAAGCTGCATGGGTTCTGTTGAGATCAAAAGGCATGAGTTCTTCAGAGGTGTGAATTGGGCTCTGATTAGATCAATTAAACCTCCTGAGGTTCCTGCTGATATGAACAAGATTAGAAGTAGCAGAGTTTTGATGCCAAAACTAAGCAAGAAAGATAGGGATCAACCCTATCAGATTACTCATCATTTTGACTACTTCTAA 1527 0.4859 MATTKAIARDESDYDSSCSSLTTVPESSRSWMTNLSFSSRRRSSSVSVCSSTTTDTTTSSSLSHGSHAKPHKANQAAWEAMSRLRRDSNGQLGLHHFRLLRRLGGGDIGNVYLCQIRNPLVVGSKQSLYAMKVVDREALSVRNKLQRAEMEKEILGMLDHPFLPTLYAEFEASHYSCLVMEFCPGGDLYASRQREPGKRFSIQSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKSSFKTIPRSSSSTSSSPACAAPMQSCFSSASFRSKSKRESRVITIIRENVSVQKEQEEKDDEDDIDDNDDDEPELVAEPINAKSMSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNGKTLINILKQSLAFPRIAASSSKEYEEMVRVQDLISKLLVKNPKKRIGSCMGSVEIKRHEFFRGVNWALIRSIKPPEVPADMNKIRSSRVLMPKLSKKDRDQPYQITHHFDYF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1320 508 CDD STKc_phototropin_like 95 475 - -
Prci9g1320 508 FunFam serine/threonine-protein kinase D6PK-like 345 475 - -
Prci9g1320 508 Gene3D Phosphorylase Kinase; domain 1 95 182 - -
Prci9g1320 508 FunFam protein kinase PINOID 2 95 182 - -
Prci9g1320 508 SMART serkin_6 97 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1320 508 PANTHER FLIPPASE KINASE 1-RELATED 32 478 - -
Prci9g1320 508 MobiDBLite consensus disorder prediction 46 68 - -
Prci9g1320 508 MobiDBLite consensus disorder prediction 320 336 - -
Prci9g1320 508 Coils Coil 131 151 - -
Prci9g1320 508 Gene3D Transferase(Phosphotransferase) domain 1 345 475 - -
Prci9g1320 508 Gene3D Transferase(Phosphotransferase) domain 1 183 252 - -
Prci9g1320 508 SUPERFAMILY Protein kinase-like (PK-like) 81 478 IPR011009 -
Prci9g1320 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Prci9g1320 508 FunFam protein kinase PINOID 183 251 - -
Prci9g1320 508 MobiDBLite consensus disorder prediction 46 74 - -
Prci9g1320 508 Pfam Protein kinase domain 98 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1320 508 Pfam Protein kinase domain 347 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1320 508 MobiDBLite consensus disorder prediction 315 336 - -
Prci9g1320 508 ProSiteProfiles Protein kinase domain profile. 97 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1320 Prci-Chr9 26857363 26859311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1320 1 508 AGC Kinase Gene Family AT2G26700 56.066 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci9g1320 Pkinase 2.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1320 K08286 - gmx:100777988 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1320 9 26857363 26859311 Prci9g1320 9 26857363 26859311 ECH