Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1300 ATGGTGCATTCAAGGAAGTTCAGAGGTGTCAGACAGCGTCATTGGGGCTCTTGGGTCTCCGAAATCCGCCACCCCCTCTTAAAGAGGAGGGTGTGGCTGGGGACGTTTGAGACGGCGGAAGAAGCGGCGAGAGCGTATGATCAAGCTGCCATTCTGATGAGTGGCCGGAATGCCAAGACCAATTTCCCGATGTCACAGACTCCGGACGGCGATTCCAACAAGGCGGCTGGGGCGGCCAGGGATCTCGAGGAGATCCTGCACGCCAAGTTGAGGAAATGCGGGAAGCTGCCGTCGCCGTCCATGACGTGCCTGAGGCTGGACACAGAGAACTCCAACATCGGAGTGTGGCAGAAACGCGCCGGCCAGCGTACCGATAACTCCAATTGGGTGATGACGGTCGAGCTGGGGAAGAAGGCCGGAAGTGATAATCATAATAATATCAATAACAGCAACGGTAATGGAGTGGAGAAAACGACGACGCCGTCGTGGAAGTGCTCTGAGTCTGCAATCTCATCGGGAGGGCCGGAAGTGACGATGGGGGGAGGAGGGTTGAACGAAGAAGAAAGAATTGCACTGCAAATGATTGAAGAACTGCTCAACAGAAACTGTCCAAGTCCTCCGGCACCTTCATTTGATCATCATGGTCTGGTTGAAGAAGACAACCATGCTCATGGCGAAAGCTTTCTCTTTTGA 693 0.5411 MVHSRKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPMSQTPDGDSNKAAGAARDLEEILHAKLRKCGKLPSPSMTCLRLDTENSNIGVWQKRAGQRTDNSNWVMTVELGKKAGSDNHNNINNSNGNGVEKTTTPSWKCSESAISSGGPEVTMGGGGLNEEERIALQMIEELLNRNCPSPPAPSFDHHGLVEEDNHAHGESFLF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1300 230 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Prci9g1300 230 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Prci9g1300 230 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 152 - -
Prci9g1300 230 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Prci9g1300 230 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Prci9g1300 230 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Prci9g1300 230 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Prci9g1300 230 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Prci9g1300 230 MobiDBLite consensus disorder prediction 140 161 - -
Prci9g1300 230 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Prci9g1300 230 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1300 Prci-Chr9 26700429 26701736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1300 1 202 AP2-EREBP Transcription Factor Family AT1G15360 57.143 9.79e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci9g1300 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1300 - - adu:107472039 275.404