Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1287 ATGTCGAACTGCAGCATGGATGTTGCCCCTGAGCAACTCTGCTACATCCCTTGCAACTTTTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCTTACTTGACATAGTGACCGTTCGATGTGGACACTGCAGCAATCTGTGGTCAGTGAACATGGCTGCTGCGTTTCAGTCACTGTCATGGCAAGATGTTCAGGGGCCTGGGTACAACAATCCGGAATATAGAATTGACACAGGTTCCTCTTCCAAATGCAACAATAATATGATCGCAATGAGAGCACCCACCAATAATGTAACCAAGGAAAGAATTGTGAACCGGCCTCCCGAGAAGAGGCAGCGCGTACCTTCAGCCTATAATCAGTTCATAAAGGAAGAGATTCAGAGGATTAAGGCTAATAATCCAGATATCAGTCACAGGGAAGCATTCAGTACAGCTGCGAAGAACTGGGCACACTTCCCTCATATTCATTTTGGGCTGATGTTGGAGACTAACAATCAAGCTAAGGTGGAGAATGGGACTGAGAAGCATTTAATGACGAGGGCAGCACTTTTGAACAAATGA 564 0.4592 MSNCSMDVAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVQGPGYNNPEYRIDTGSSSKCNNNMIAMRAPTNNVTKERIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQAKVENGTEKHLMTRAALLNK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1287 187 CDD HMG-box_SF 114 150 - -
Prci9g1287 187 FunFam Axial regulator YABBY 105 176 - -
Prci9g1287 187 Pfam YABBY protein 9 160 IPR006780 GO:0007275
Prci9g1287 187 SUPERFAMILY HMG-box 103 153 IPR036910 -
Prci9g1287 187 Gene3D High mobility group box domain 97 157 IPR036910 -
Prci9g1287 187 PANTHER PROTEIN YABBY 6-RELATED 1 169 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1287 Prci-Chr9 26603833 26610170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1287 1 170 C2C2-YABBY Transcription Factor Family AT2G26580 75.294 1.98e-89 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci9g1287 YABBY 5.7e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1287 K25796 - gmx:100499942 352.058