Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1268 ATGGACCTTCAATTAGGCCTCTCTCTTCCAACCCTCAGTACTTCTTCTGCCTCTGATTCTGATCATCTCTCTCCCCACTCTCTCAGAAAACGTAGTTTCAGTGATCTCCTTCACCATGGCAGACTTAGAGACGACAACCACCACCATGACGTCGGTCTGCTTCCGACACTGCCTCTCCTTCCTTTAACCCCTACCCGTGAAGCTGACAACCTCGACGACGACCTCCATACCAGCTGCTCCATTGTCACCAAAAACGATGGGGATGATGGTGGAGAATCTGCAGCAGTAGGGTGGCCACCCATAATGTCACAGAGGAAGAAGCGTCAGTTTGAAGGCGATGGCATGGTGGGGATTCGTCATAAACGTGGTTCTGTGGATCCTCTCAGAGAATCTGAAGCGTTGTACGTGAAGGTAACGATGGAGGGAGAAGGAATTGGACGAAAGATTGATCTCAGCTTGCATCATTCTTTTCACAAGCTGAAGGAAACCCTGATCGCCATGTTTGGAAAATGTCATCGCCATTCAGACTGTTATCTATTAGTCTATCAGGACAGTGATGGTGACTGGTTGCTTGCAGAGGATCTGCCATGGAAAAACTTCCTCGAGTGTGCTCAACGTCTCAAATTGCTAAAGAGAACGAGTTAA 645 0.4837 MDLQLGLSLPTLSTSSASDSDHLSPHSLRKRSFSDLLHHGRLRDDNHHHDVGLLPTLPLLPLTPTREADNLDDDLHTSCSIVTKNDGDDGGESAAVGWPPIMSQRKKRQFEGDGMVGIRHKRGSVDPLRESEALYVKVTMEGEGIGRKIDLSLHHSFHKLKETLIAMFGKCHRHSDCYLLVYQDSDGDWLLAEDLPWKNFLECAQRLKLLKRTS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1268 214 Pfam AUX/IAA family 23 212 IPR033389 -
Prci9g1268 214 ProSiteProfiles PB1 domain profile. 133 214 IPR000270 GO:0005515
Prci9g1268 214 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 213 IPR003311 GO:0005634|GO:0006355
Prci9g1268 214 MobiDBLite consensus disorder prediction 1 27 - -
Prci9g1268 214 MobiDBLite consensus disorder prediction 7 22 - -
Prci9g1268 214 Gene3D - 128 214 - -
Prci9g1268 214 SUPERFAMILY CAD & PB1 domains 127 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1268 Prci-Chr9 26450393 26452140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1268 135 213 B3 DNA Binding Superfamily AT1G19850 34.940 6.99e-09 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci9g1268 AUX_IAA 4.2e-16 CL0072