Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1267 ATGGACCTTCAATTAGGCCTCTCTCTTCCAACCCTCAGTACTTCTTCTGCCTCTGATTCTGATCATCTCTCTCCCCACTCTCTCAGAAAACGTAGTTTCAGTGATCTCCTTCACCATGGCAGACTTAGAGACGACAACCACCACCATGACGTCGGTCTGCTTCCGACACTGCCTCTCCTTCCTTTAACCCCTACCCGTGAAGCTGACAACCTCGACGACGACCTCCATACCAGCTGCTCCATTGTCACCAAAAACGATGGGGATGATGGTGGAGAATCTGCAGCAGTAGGGTGGCCACCCATAATGTCACAGAGGAAGAAGCGTCAGTTTGAAGGCGATGGCATGGTGGGGATTCGTCATAAACGTGGTTCTGTGGATCCTCTCAGAGAATCTGAAGCGTTGTACGTGAAGGTAACGATGGAGGGAGAAGGAATTGGACGAAAGATTGATCTCAGCTTGCATCATTCTTTTCACAAGCTGAAGGAAACCCTGATCGCCATGTTTGGAAAATGTCATCGCCATTCAGACTGTTATCTATTAGTCTATCAGGACAGTGATGGTGACTGGTTGCTTGCAGAGGATCTGCCATGGAAATTTTTTCCCTTGCTATCCGTTATATTTCCTATGCAAATAATTTGCACGTAA 645 0.476 MDLQLGLSLPTLSTSSASDSDHLSPHSLRKRSFSDLLHHGRLRDDNHHHDVGLLPTLPLLPLTPTREADNLDDDLHTSCSIVTKNDGDDGGESAAVGWPPIMSQRKKRQFEGDGMVGIRHKRGSVDPLRESEALYVKVTMEGEGIGRKIDLSLHHSFHKLKETLIAMFGKCHRHSDCYLLVYQDSDGDWLLAEDLPWKFFPLLSVIFPMQIICT 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1267 214 Pfam AUX/IAA family 177 200 IPR033389 -
Prci9g1267 214 Pfam AUX/IAA family 23 170 IPR033389 -
Prci9g1267 214 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 200 IPR003311 GO:0005634|GO:0006355
Prci9g1267 214 Gene3D - 128 210 - -
Prci9g1267 214 MobiDBLite consensus disorder prediction 1 27 - -
Prci9g1267 214 MobiDBLite consensus disorder prediction 7 22 - -
Prci9g1267 214 SUPERFAMILY CAD & PB1 domains 127 200 - -
Prci9g1267 214 ProSiteProfiles PB1 domain profile. 133 211 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1267 Prci-Chr9 26450393 26452140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1267 136 200 B3 DNA Binding Superfamily AT3G61830 37.313 5.69e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci9g1267 AUX_IAA 4.2e-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1267 K14484 - gmx:100808466 138.272