Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1250 ATGGAGAAGAAGTGTGGGTGCTGGGCTGTTCTGAAACGCGGCGTTAGAGCGACTGAGACACGTTACCTGAATGCTAGTAATCGAGAGTTATGTCCTCCCAATGAAGCTCAACTATCTTATGATAATACTGTTCCCCCATCTGAGGAAAACAGGGCTCCTTGCCAGCTTCTTCAATTTTCTTTTCAAGAACTAAAAGCTGCAACCGGAAATTTCAGACCTGATAGCATTCTTGGGGAAGGTGGGTTCGGATTTGTGTTCAAGGGGTGGATAGAAGAAAATGGGACTGCCCCTGCCAAACCTGGTTCAGGGGTTACGGTGGCTGTAAAAAGCTTGAAGCCAGATGGTCTCCAGGGCCACAGAGAATGGGTGGCTGAAGTTGACTTCCTCGGACAGCTCCACCACCCTAACCTTGTGAAACTTATTGGTTACTGCATTGAAGATGATCAACGACTTCTTGTTTATGAGTTTATGACCCGTGGAAGTCTAGAAAATCATCTTTTCAGAAGAACTGTGCCGCTTCCATGGGCCAATAGGGTAAAGATTGCTCTTGGTGCAGCTAAAGGGTTGGCCTTCCTTCATAGTGGTCCAGAACCAGTCATTTATAGAGATTTTAAAACATCAAACATTTTGCTTGATTCGGAGTATAATGCGAAGCTTTCAGATTTTGGTCTAGCTAAAGCAGGGCCTCAAGGAGACAAGACACATGTTTCTACCAGAGTTGTTGGAACTTATGGTTATGCTGCTCCTGAATATGTCATGACTGGGCACTTGACAGCTAAAAGCGATGTTTATAGCTTTGGAGTTGTATTACTTGAGATTTTAACAGGAAGAAGATCTATGGACAAGAAGCGCCCAAGTGGGGAACAAAATCTTGTATCATGGGCTCGGCCATATTTAGCTGACAAGCGAAAGCTATACCAACTTGTGGATCCTCGCTTGGAATTAAACTATTCTCTCAAAGGGGTGCATAAAATTTCTCAATTAGCTTACAATTGCCTCAGTAGGGACCCCAAATGCCGTCCTAACATGGATGAAGTTGTGAAGGCTCTTATTCCATTGCAGGATCTCAATGACCTTGCAATCTTATCTTACCACACCCGTTCATCATCTCAACAAGGGAGAAGAAAAAAGAAAGCAGATGGAACTCCCCACCCACAGCTTGCCTACACACAATCCAAAATCATCAAGGGTACTTCTCCCTTGAACACCAGCAAGCATCATCGATGA 1227 0.4442 MEKKCGCWAVLKRGVRATETRYLNASNRELCPPNEAQLSYDNTVPPSEENRAPCQLLQFSFQELKAATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGVTVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWANRVKIALGAAKGLAFLHSGPEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVHKISQLAYNCLSRDPKCRPNMDEVVKALIPLQDLNDLAILSYHTRSSSQQGRRKKKADGTPHPQLAYTQSKIIKGTSPLNTSKHHR 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1250 408 PANTHER OS01G0588500 PROTEIN-RELATED 54 354 - -
Prci9g1250 408 MobiDBLite consensus disorder prediction 366 408 - -
Prci9g1250 408 ProSitePatterns Protein kinases ATP-binding region signature. 77 109 IPR017441 GO:0005524
Prci9g1250 408 FunFam Serine/threonine-protein kinase BIK1 39 156 - -
Prci9g1250 408 SUPERFAMILY Protein kinase-like (PK-like) 54 353 IPR011009 -
Prci9g1250 408 Gene3D Transferase(Phosphotransferase) domain 1 157 369 - -
Prci9g1250 408 Pfam Protein tyrosine and serine/threonine kinase 75 350 IPR001245 GO:0004672|GO:0006468
Prci9g1250 408 CDD STKc_IRAK 77 353 - -
Prci9g1250 408 FunFam Probable serine/threonine-protein kinase PBL8 157 371 - -
Prci9g1250 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Prci9g1250 408 Gene3D Phosphorylase Kinase; domain 1 47 156 - -
Prci9g1250 408 MobiDBLite consensus disorder prediction 385 401 - -
Prci9g1250 408 ProSiteProfiles Protein kinase domain profile. 71 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1250 Prci-Chr9 26296760 26300729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1250 59 350 Glycoside Hydrolase AT3G07070 56.081 9.55e-111 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci9g1250 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1250 - - gmx:100305441 738.028