Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1195 ATGGGAAACAAAAAGAAGCAAGTTGCGGAAAAATCAAGTGATAACAGTGGAAGTCAAAGTAAAGCAGGAGATAGCAGCTCCAAAGCTTATGATAAGGACACTGAGGTATTTATTTCCATGTCTCAAGAGTTAAAGGGTGAAGGGAACAAGCTGTTCCAAAAGAGAGATCATGAAGGAGCTCTCATAAAATATGAGAAAGCCATCAAATTGCTTCCAAGAAATCATATAGATGTGTCCTGTCTGAGGAGTTATATGGCCGCATGCTATATGCAGATGGGACTCAGTGAATATCCAAGGGCCATTCATGAATGCAATTTGGCTCTTGAAGTTACTCCAAAGTACAGTAAAGCCCTTTTGAAGAGAGCAAGGTGCTATGAGGCTTTAAATAGTCTGGATTTAGCTCTGAGAGATGTTAGTACTGTACTGAAGATGGAGCCAAACAATATCATGGCATTGGAAATTTTGGAGAAGGTGAAAAATACACTTGAGGAAAAGGGGTTAAAAGTAGCTGGTATGGCAATTGAGTTGCCTTCTGATCATGCTGAACCTCCTTGCGTGCCTCAAGAAGTAGTGAAAGAGAAGAAACGCAAGAAGAGCCGAAAGGTTGAGTCGATGAATGCGGATAATGTTGGTGTTGAAAAGCTCGCAGAGGAGAAGATGGAAGACAAGAAAGCAGAGGACAGTTTTGAGAAGAAGAAGGCTGTGAGCAAATCCAAGGAGAAGTTGGAAGACAAGAAGGCAGAGCACAGTGTTGAGCAGAAGAAGGCTGTGAACAAATCCAAAAAGAAGGTGGCCAAGGAAAAGTTTGATGAGAAGAAGGCTGACGATATAAAGGAGGTTGTTGAGGAAAATTTTAATGGTAGAGAAAAGGAAGATGCAGCTAAGAAAATAGTGAAACTTGTTTTTGGTGAGGACATTAGATATGCAGAATTGCAAGTCAACTGCAGTCTCCAGCACCTAAGGGAAGTTATCAGTGACCGATTTCCAAGCCTAGGAGCAGTTCTTGTCAAATACAGGGATCAAGAAGGTGATTTAGTCACAATCACTTCTGATGAAGAATTACGATGGGCTGAAAGATCAGCTGGATCAGATAGTTCTATCCGCCTATACATAGTGGCTGCCAATCCTGAGCAGGATCCATTGTTTGAGAAAATTAATGAAAAGAAGGAGCAAAAGCCTGTCATTGATAATGCACATGAGAATGGTTGTGTGGTAAAAGAAGAGGAAATGATTAGGTCATCTTGCATTGAGGATTGGATAATCCAATTTGCTCAACTGTTCAAGAACTATGTTGGAATTGAATCTGATAGATATTTAGATTTTCATGAACTCGGAATGAAACTGTATTCCGAGGCTATGGAGGAGACAGTTACAAGTGAAGAAGCACAAAGCCTATTTGACATGGCGGGAGCTAAGTTCCAAGAAATGGCAGCTTTAGCATTGTTCAATTGGGGAAATGTTCACATGTCCAGAGCAAGGAAGAAAGTGAATTTCACAGAAGAAACTTCTAATGAGCATCTGCATGAACAGATAAAAAATTCATATGATTGGGTGCAGCAAGAATATAAAAGTGCAGGAGAAAAATATGAAGAAGCCATTAAAATTAAACCTGATTTTTATGAAGGCTTCCTGGCACTTGGGCAACAGCAGTTTGAGCAAGCAAAACTTTCTTGGTATTATGCAATTAGCGTGAATGTTGAGTTAGCAACATGGCCATCTACCGACATTCTTCAACTTTACAACAATGCTGAGGAAAACATGGAGAAAGGATTGCAGATATGGGAAGAATCAGAAGAGAGATGCTTGGATGGAGATTCTCAATCAAAGGATATCAAATTACATATACGGAATATGGGATTGGATTGCCCAGTGCAAAATATATCATCAGAAGAAATTGCAGCTCAGGCAGCAACTTTGAGGTCCCAAATAAATATCCTTTGGGGTACCATGCTATATGAGCGTTCAATCATGGAATTCAAATTAGGGCTGCCAGTATGGCACGAATGTCTTGAAGTTGCAGTTGAGAAGTTTGAACTTGCTGGAGCTTCTCCAACGGATATAGCTGTAATGTTGAAGAACCACTGTTCAAATAATACTGCTGCAGAAGGTCTAGGATTCAACATTGATGAAATAGTACAAGCTTGGAATGAGATGTATGAAGCTAGAAGGTGGCAGAGTCAAGTTTCATCGGTTCATTTGGAACCCTTATTCAGAAGGCGAGCTTCAAAAATTTATCATGCCTTAGAGCTTGCATGA 2256 0.402 MGNKKKQVAEKSSDNSGSQSKAGDSSSKAYDKDTEVFISMSQELKGEGNKLFQKRDHEGALIKYEKAIKLLPRNHIDVSCLRSYMAACYMQMGLSEYPRAIHECNLALEVTPKYSKALLKRARCYEALNSLDLALRDVSTVLKMEPNNIMALEILEKVKNTLEEKGLKVAGMAIELPSDHAEPPCVPQEVVKEKKRKKSRKVESMNADNVGVEKLAEEKMEDKKAEDSFEKKKAVSKSKEKLEDKKAEHSVEQKKAVNKSKKKVAKEKFDEKKADDIKEVVEENFNGREKEDAAKKIVKLVFGEDIRYAELQVNCSLQHLREVISDRFPSLGAVLVKYRDQEGDLVTITSDEELRWAERSAGSDSSIRLYIVAANPEQDPLFEKINEKKEQKPVIDNAHENGCVVKEEEMIRSSCIEDWIIQFAQLFKNYVGIESDRYLDFHELGMKLYSEAMEETVTSEEAQSLFDMAGAKFQEMAALALFNWGNVHMSRARKKVNFTEETSNEHLHEQIKNSYDWVQQEYKSAGEKYEEAIKIKPDFYEGFLALGQQQFEQAKLSWYYAISVNVELATWPSTDILQLYNNAEENMEKGLQIWEESEERCLDGDSQSKDIKLHIRNMGLDCPVQNISSEEIAAQAATLRSQINILWGTMLYERSIMEFKLGLPVWHECLEVAVEKFELAGASPTDIAVMLKNHCSNNTAAEGLGFNIDEIVQAWNEMYEARRWQSQVSSVHLEPLFRRRASKIYHALELA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1195 751 MobiDBLite consensus disorder prediction 212 259 - -
Prci9g1195 751 Pfam PB1 domain 298 372 IPR000270 GO:0005515
Prci9g1195 751 SMART PB1_new 295 374 IPR000270 GO:0005515
Prci9g1195 751 ProSiteProfiles TPR repeat profile. 115 148 IPR019734 GO:0005515
Prci9g1195 751 SUPERFAMILY CAD & PB1 domains 296 383 - -
Prci9g1195 751 ProSiteProfiles PB1 domain profile. 295 374 IPR000270 GO:0005515
Prci9g1195 751 Gene3D - 283 373 - -
Prci9g1195 751 CDD PB1 297 371 - -
Prci9g1195 751 SMART tpr_5 41 74 IPR019734 GO:0005515
Prci9g1195 751 SMART tpr_5 115 148 IPR019734 GO:0005515
Prci9g1195 751 SMART tpr_5 79 114 IPR019734 GO:0005515
Prci9g1195 751 MobiDBLite consensus disorder prediction 190 259 - -
Prci9g1195 751 Gene3D Tetratricopeptide repeat domain 441 617 IPR011990 GO:0005515
Prci9g1195 751 Gene3D Tetratricopeptide repeat domain 31 175 IPR011990 GO:0005515
Prci9g1195 751 Coils Coil 232 259 - -
Prci9g1195 751 PANTHER PROTEIN CLMP1 3 749 IPR044517 -
Prci9g1195 751 MobiDBLite consensus disorder prediction 1 30 - -
Prci9g1195 751 SUPERFAMILY TPR-like 30 161 IPR011990 GO:0005515
Prci9g1195 751 ProSiteProfiles TPR repeat profile. 41 74 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1195 Prci-Chr9 25940022 25944622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1195 24 148 Calmodulin-binding Proteins AT3G25230 32.117 4.65e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1195 K26538 - gmx:100807387 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1195 9 25940022 25944622 Prci9g1195 9 25940022 25944622 ECH