Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1182 ATGATTGCAGAACAGAACCAGGTGAACTTTCTCCCTCCTCTGCGATCTGGAGAGTGGTCATATATCGGAGCTCGCCCTTATATGGAAGATACTCACATCTGCATTGGAGACTTGGGAGAGAAGTTTGGTTATGATGTAGTCAGCGAGGAAGTTGTTTCCTTTTATGGGGTATTTGACGGACATGGAGGGAAGAGTGCTGCAGTGTTTGTCCGCGATCAGCTTCCAAGAGTTATTATTGAGGATGCTGATTTTCCTGTGGAACTAGAGAAGGTGGTCACTAGGTCATTTTTACGGACAGATGCTGAATTTGCAGAGACATGCTCTCTTGGGTCTTCCTTGTCTTCTGGTACGACTGCATTAACTGCGATTATTTTTGGGAGCTCTTTGCTTGTGGCCAATGCTGGAGACTGCAGGGCTGTTTTGTCCAGACGTGGAAGGGCAATAGAAATGTCCAAAGATCATAAGCCATTATGCATGAAAGAGAGGAAGAGAGTTGAGTCCCTCGGAGGATTCATCCGTGACGGTTATCTGAATGGCCAGTTAGGTGTCACACGGGCGATAGGCGACTGGGATCTCGAGGGCTTGAAGGAAATGAGCGAAAGAGGAGGACCCTTGACTGCTGAGCCAGAACTCAAACGAATCACACTGACCAAAGAAGATGAGTTTTTGATAATTGGAAGTGATGGAATCTGGGATGTTTTCAGCAACCAAAATGCTGTAGATTTTGCAAGGAGGAGGCTTCGAGAACACAATGATGTGAGACTATGCTGTAAAGAGATGGTGGAGGAAGCCATAAACAGAGATTCAACAGATAATTTAACAGTTGTGATTGTGTGTTTTCACTCAGAACCACCACCACCACTGGTGGTTGAGAGGTCGAGAGTCAGAAGAAGCATATCTGCTGAGTGA 909 0.4598 MIAEQNQVNFLPPLRSGEWSYIGARPYMEDTHICIGDLGEKFGYDVVSEEVVSFYGVFDGHGGKSAAVFVRDQLPRVIIEDADFPVELEKVVTRSFLRTDAEFAETCSLGSSLSSGTTALTAIIFGSSLLVANAGDCRAVLSRRGRAIEMSKDHKPLCMKERKRVESLGGFIRDGYLNGQLGVTRAIGDWDLEGLKEMSERGGPLTAEPELKRITLTKEDEFLIIGSDGIWDVFSNQNAVDFARRRLREHNDVRLCCKEMVEEAINRDSTDNLTVVIVCFHSEPPPPLVVERSRVRRSISAE 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1182 302 SUPERFAMILY PP2C-like 10 282 IPR036457 -
Prci9g1182 302 CDD PP2Cc 23 280 IPR001932 -
Prci9g1182 302 PANTHER PROTEIN PHOSPHATASE 2C 10 278 IPR015655 GO:0004722|GO:0006470
Prci9g1182 302 ProSiteProfiles PPM-type phosphatase domain profile. 15 280 IPR001932 -
Prci9g1182 302 SMART PP2C_4 5 278 IPR001932 -
Prci9g1182 302 Pfam Protein phosphatase 2C 23 272 IPR001932 -
Prci9g1182 302 FunFam Probable protein phosphatase 2C 22 2 283 - -
Prci9g1182 302 ProSitePatterns PPM-type phosphatase domain signature. 54 62 IPR000222 GO:0043169
Prci9g1182 302 Gene3D - 4 284 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1182 Prci-Chr9 25794798 25797646 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1182 4 302 PP2C-type Phosphatase Gene Family AT2G25620 59.136 4.38e-130 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Prci9g1182 PP2C 1.8e-66 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1182 K14803 - rcu:8275709 450.284