Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1177 ATGTGTTTGCAGGACGCCGAGCAAGTTGGCCCCGATATGGAAAACCCAGATGATAGGAGGTCTTGGTCTTTGCATTGTGACCTCATGAATACCCACATGGAAAAGGAACCTCCTTTTAGAACTCCCGGCGATCGGAGTTTCAGTGTTGGGAATTCATTTCCGCTGGAAAGCATAAATGAGGACACAGTGATTGCAGACAAAAAACAGAACCAGATGAACTTTGTCCCTGCTCTGCGATCTGGAGAGTGTTCAGATATCGGAGCTCGCCCTTACATGGAAGATACTCACATCTGCATTGGAGACTTGGGAAAGAAGTTTGGTTGTGATGTACTCAGTGAGGAAGTTATTTCCTTTTATGGGGTATTTGACGGACATGGAGGGGAGAGTGCTGCAGTGTTCGCCCGCGATCAGCTTCCAAGAGTTATTATTGAGGATGCTGATTTTCCTGTGGAACTAGAGAAGGTGGTCACCAGGTCATTTTTACGGACAGATGCTGAATTTGCAGAGACATGCTCTCTTGGGTCTTCCTTGTCCTCTGGTACAACCGCATTTACTGCAATTATTTTTGGGAGGTCTTTGCTTGTGGCCAATGCTGGAGACTGCAGGGCTGTTTTGTCCAGACGTGGAAGGGCAATAGAAATGTCCAAAGATCATAAGCCATTATGCATGAAAGAGAGGAAGAGAGTTGAGTCCCTCGGTGGATTCATCGATGACGATTATCTGAATGGCCAGTTAGGTGTCACACGGGCGATAGGCGACTGGCATCTCGAGGGCTTGAAGGAAACGAGTGAAAGAGGAGGACCCTTGAGTGCTGAGCCAGAACTCAAACGAATCACACTGACCAAAGAAGATGAGTTTTTGATAATTGGAAGTGATGGAATCTGGGATGTTTTCAGCAACCAAAATGCTGTAGATTTTGCAAGGAGGAGGCTTCGAGAACACAATGATGTGAGACGATGCTGTGAAGAGATGGTGGAGGAAGCCATAAAGAGAGATTCAACAGATAATTTAACAGTTGTGATGGTGTGTTTTCACTCAGAACCACCGCCACCAGTGGTGGTTGAGAGGTCGAGAGTTAAGAGAAGCATATCTGCTGAGGGACTTCAGAATCTCAAGTCCTCCTTAGGAGGATAG 1134 0.4656 MCLQDAEQVGPDMENPDDRRSWSLHCDLMNTHMEKEPPFRTPGDRSFSVGNSFPLESINEDTVIADKKQNQMNFVPALRSGECSDIGARPYMEDTHICIGDLGKKFGCDVLSEEVISFYGVFDGHGGESAAVFARDQLPRVIIEDADFPVELEKVVTRSFLRTDAEFAETCSLGSSLSSGTTAFTAIIFGRSLLVANAGDCRAVLSRRGRAIEMSKDHKPLCMKERKRVESLGGFIDDDYLNGQLGVTRAIGDWHLEGLKETSERGGPLSAEPELKRITLTKEDEFLIIGSDGIWDVFSNQNAVDFARRRLREHNDVRRCCEEMVEEAIKRDSTDNLTVVMVCFHSEPPPPVVVERSRVKRSISAEGLQNLKSSLGG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1177 377 MobiDBLite consensus disorder prediction 1 21 - -
Prci9g1177 377 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Prci9g1177 377 ProSiteProfiles PPM-type phosphatase domain profile. 79 344 IPR001932 -
Prci9g1177 377 Pfam Protein phosphatase 2C 86 336 IPR001932 -
Prci9g1177 377 SUPERFAMILY PP2C-like 72 346 IPR036457 -
Prci9g1177 377 CDD PP2Cc 79 344 IPR001932 -
Prci9g1177 377 FunFam Probable protein phosphatase 2C 22 63 347 - -
Prci9g1177 377 Gene3D - 60 348 IPR036457 -
Prci9g1177 377 PANTHER PROTEIN PHOSPHATASE 2C 66 342 IPR015655 GO:0004722|GO:0006470
Prci9g1177 377 SMART PP2C_4 69 342 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1177 Prci-Chr9 25759947 25763428 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1177 16 377 PP2C-type Phosphatase Gene Family AT2G25620 53.825 1.30e-131 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Prci9g1177 PP2C 9.8e-67 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1177 K14803 - gmx:100782648 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1177 9 25759947 25763428 Prci9g1177 9 25759947 25763428 ECH