Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1176 ATGGAAAACCCAGATGATAGGAGGTCTTGGTCTTTGCATTGTGACCTCATGAATACCCACATGGAAAAGGAACCTCCTTTTAGAACTCCCGGCGATCGGAGTTTCAGTGTTGGGAATTCATTTCCGCTGGAAAGCATAAATGAGGACACAGTGATTGCAGACAAAAAACAGAACCAGATGAACTTTGTCCCTGCTCTGCGATCTGGAGAGTGTTCAGATATCGGAGCTCGCCCTTACATGGAAGATACTCACATCTGCATTGGAGACTTGGGAAAGAAGTTTGGTTGTGATGTACTCAGTGAGGAAGTTATTTCCTTTTATGGGGTATTTGACGGACATGGAGGGGAGAGTGCTGCAGTGTTCGCCCGCGATCAGCTTCCAAGAGTTATTATTGAGGATGCTGATTTTCCTGTGGAACTAGAGAAGGTGGTCACCAGGTCATTTTTACGGACAGATGCTGAATTTGCAGAGACATGCTCTCTTGGGTCTTCCTTGTCCTCTGGTACAACCGCATTTACTGCAATTATTTTTGGGAGGTCTTTGCTTGTGGCCAATGCTGGAGACTGCAGGGCTGTTTTGTCCAGACGTGGAAGGGCAATAGAAATGTCCAAAGATCATAAGCCATTATGCATGAAAGAGAGGAAGAGAGTTGAGTCCCTCGGTGGATTCATCGATGACGATTATCTGAATGGCCAGTTAGGTGTCACACGGGCGATAGGCGACTGGCATCTCGAGGGCTTGAAGGAAACGAGTGAAAGAGGAGGACCCTTGAGTGCTGAGCCAGAACTCAAACGAATCACACTGACCAAAGAAGATGAGTTTTTGATAATTGGAAGTGATGGAATCTGGGATGTTTTCAGCAACCAAAATGCTGTAGATTTTGCAAGGAGGAGGCTTCGAGAACACAATGATGTGAGACGATGCTGTGAAGAGATGGTGGAGGAAGCCATAAAGAGAGATTCAACAGATAATTTAACAGTTGTGATGGTGTGTTTTCACTCAGAACCACCGCCACCAGTGGTGGTTGAGAGGTCGAGAGTTAAGAGAAGCATATCTGCTGAGGGACTTCAGAATCTCAAGTCCTCCTTAGGAGGATAG 1098 0.4617 MENPDDRRSWSLHCDLMNTHMEKEPPFRTPGDRSFSVGNSFPLESINEDTVIADKKQNQMNFVPALRSGECSDIGARPYMEDTHICIGDLGKKFGCDVLSEEVISFYGVFDGHGGESAAVFARDQLPRVIIEDADFPVELEKVVTRSFLRTDAEFAETCSLGSSLSSGTTAFTAIIFGRSLLVANAGDCRAVLSRRGRAIEMSKDHKPLCMKERKRVESLGGFIDDDYLNGQLGVTRAIGDWHLEGLKETSERGGPLSAEPELKRITLTKEDEFLIIGSDGIWDVFSNQNAVDFARRRLREHNDVRRCCEEMVEEAIKRDSTDNLTVVMVCFHSEPPPPVVVERSRVKRSISAEGLQNLKSSLGG 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1176 365 ProSitePatterns PPM-type phosphatase domain signature. 106 114 IPR000222 GO:0043169
Prci9g1176 365 Gene3D - 48 336 IPR036457 -
Prci9g1176 365 FunFam Probable protein phosphatase 2C 22 51 335 - -
Prci9g1176 365 Pfam Protein phosphatase 2C 74 324 IPR001932 -
Prci9g1176 365 SUPERFAMILY PP2C-like 60 334 IPR036457 -
Prci9g1176 365 CDD PP2Cc 67 332 IPR001932 -
Prci9g1176 365 PANTHER PROTEIN PHOSPHATASE 2C 54 330 IPR015655 GO:0004722|GO:0006470
Prci9g1176 365 SMART PP2C_4 57 330 IPR001932 -
Prci9g1176 365 ProSiteProfiles PPM-type phosphatase domain profile. 67 332 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1176 Prci-Chr9 25759947 25763428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1176 4 365 PP2C-type Phosphatase Gene Family AT2G25620 53.825 6.62e-132 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Prci9g1176 PP2C 8.9e-67 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1176 K14803 - gmx:100782648 547.74