Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1166 ATGGCCGGAAATCTTCCCGGAGTTGAGTGTGCTCGAAGGAGAAGGTTTCATCAGAGTGGAGTGTGGTCCGATACACCCTCCTTTATGCCTCCTCATACTTCAACTCGACGCTCTTCTTTCTGCTTGTACACTAGCAACCATGAATCTCTTTCTTCTTCATCTTTGCTGCAGCAAAGAAGCCTGACGTACCAGGCATACCCACATGAAATGCTGGAAGGTGCAGCCGGAGAAGCCAAACAGAGACTGGATGCAAGATTAGGAACACAGAGGAAAACAGAAATCAAAAGGGAGAAGGTGAGAAGTGAAGCAGAGTTGCAGAAAGAGGTATATGGGGCAAAGAAAAATGGGAGCAGGAGATTCAGTTGGAGCAAACTGAGGTGGAAGGCATCAGAACAAGAGGATTGTGCAGTGTGCTTGGAATCATTCAAGAATGGTGACACACTCTCAAACCTGCCATGTGCACACAGGTTCCATTCGAGGTGTTTGGAGCCATGGCTAGAAAATAATTCTCACTGTCCTTGTTGCAGAACCACTATCATCGTTTCTCACTAG 552 0.4692 MAGNLPGVECARRRRFHQSGVWSDTPSFMPPHTSTRRSSFCLYTSNHESLSSSSLLQQRSLTYQAYPHEMLEGAAGEAKQRLDARLGTQRKTEIKREKVRSEAELQKEVYGAKKNGSRRFSWSKLRWKASEQEDCAVCLESFKNGDTLSNLPCAHRFHSRCLEPWLENNSHCPCCRTTIIVSH 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1166 183 Pfam Ring finger domain 134 176 IPR001841 -
Prci9g1166 183 FunFam Zinc finger family protein 109 181 - -
Prci9g1166 183 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 68 179 IPR044675 -
Prci9g1166 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 180 IPR013083 -
Prci9g1166 183 CDD RING-H2_PA-TM-RING 134 176 - -
Prci9g1166 183 ProSiteProfiles Zinc finger RING-type profile. 135 176 IPR001841 -
Prci9g1166 183 SMART ring_2 135 175 IPR001841 -
Prci9g1166 183 SUPERFAMILY RING/U-box 122 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1166 Prci-Chr9 25732429 25734260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1166 1 86 C3H Transcription Factor Family AT2G15580 51.064 8.38e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1166 - - qsa:O6P43_023997 236.113