Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1154 ATGGAGATTTTTAGATGTTTTTACTTCAATATCCTTCTTCTTGCCACTTTTTCCATTTTCTTCTTGGCAGTTTCAGCAACGGACCCTTATTCAGAGGCGCTTCTTAGTCTGAAATCTGAACTTGTGGATGAAGAAGACAGTTTACGTGACTGGGTGGTCGTGACTTCTGGAGGAAACTCAACTGGGAAATCCAATGCTTATTGTTCTTGGTCTGGAATCAAGTGTGGTAACAACTCAAAAACTGTAACCTTGATAGACTTATCCATGAAGAAACTGGGAGGTGCAATGTCAGGGAAGCAATTCAGTGTGTTCACAGAGCTTGAATATCTCAATCTCAGCCACAATTTCTTCTCTGGGCAACTTCCTGTGGAAATTTTCAACCTCACCATTCTAAGAAGCTTGGATATAAGCAGAAACAACTTTTCTGGTCACTTTCCAGGTGGGATTTCCAGACTTAAAAACTTGCTTGTACTTGACGCCTTTAGCAACAGCTTTTCCGGGCCATTGCCTGCTGAACTTTCTGAACTTGAAAATCTCAAGGTCCTTAATCTTGCTGGGAGTTACTTCAAAGGACCAATCCCATCTGAATATGGTTCCTTTAGAAGCCTTGAGTTTCTTCATCTTGCAGGAAATCTTCTCTCCGGGAATCTACCTCCAGAATTGGGTAATCTCAAAACAGTAACCCACATGGAAATCGGCTACAATTCCTACCAGGGTTTCATTCCATTTGAGTTAGGTAACATGAGTGAACTAAGGTATCTAGATATTGCTGGTGCAAATCTATCTGGCCCAATACCAAAGCAACTCTCCAACCTCACCAATTTGAAGTCACTTTATCTGTTCAGAAACCAGCTCGTGGGAACAATTCCAAGCGAGTTTAGCAAGATCAAGTCACTCACAGATTTAGATCTTTCTGACAATCTCATTTCTGGGCCCATTCCTGAAAGCTTCTCAAAGTTGGAGAGCCTGAGCCTGCTCAGCCTCATGTACAATGACATGAATGGAACTGTCCCTGAAGGCATTGCACAACTTCCAAACTTGGAAACTCTTCTTATTTGGAGCAATGACTTCTCTGGGTTACTTCCACAGAGCTTGGGCAAGAACTCAAATCTCATGTGGGTGGATGTTTCCACAAACAATTTTGTAGGCAGTATACCACCAGACATTTGTAACAGAGGAGTGCTACATAAGCTGATCCTGTTTTCAAACAGATTCTCCGGCAGCCTCTCACCATCTCTCTCGAATTGTTCTTCACTTGTTCGTCTTCGCCTGGAAGATAACTTGTTCACAGGGCATATCCCTTTGAAATTCAGACATCTTCCTGATATATCATATGTTGACATATCCAGGAATAAATTTCTTGGTGGAATCCCCTCAGATATTTCCCAAGCTATCAAGCTTACTTATTTCAATGTTTCCAATAATCCACTATTAGGAGGCACCATCCCTGCACAAACATGGTCTTTACCACTTCTGCAAAATTTTTCAGCCTCTTCCTGTCGTATTTCAGGAAATCTTCCCCAATTTGAGTCCTGCAAATCAGTCTCTAGCATTGAACTTGATAGGAACAACTTGTCTGGAGTGATCCCATTTACTGTCTCAAATTGCCAAAATCTTGAGAGTATAAAATTATCCAGTAATAATTTATCTGGTCCTATACCTGAGCAGCTTGCAAGCATTCCCGTTCTTGGTGTTGTAGACCTATCACACAATAACCTCAACGGCCCTATACCTGCAAAGTTCAGTGCTTCTTCAAGTTTACAACTTCTTAACGTGTCTTTCAACTACATCTCCGGTTCGATTCCCAAAGGAAACTTGTTCAGATTCATGGATAACAGTGCATTTGTTGGGAATCCAGAGCTATGTGGGGCACCTCTACAGCCATGTTCGGGTTCAGTTGGAATATTGGGAAGTAAAGGCACATGGAAGCTTACAAGTATAGTGCTACTGTGTGCTGGATTGCTTATATTCCTTGTTGCAGCATTATCTTTTGGAATAGTTTATTTCAGGCGAGGAGTTAAAAGCCAATGGAAGATGATCTCATTTATTGGGCTCCCTCAGTTCACAGCAAATGATGTTTTGACAAGCTTCAATACCACAGAATCAAGAGAAGGAGTGGCAAAAACACCATCACCGTCAGTTTCAAAAGCTGTTCTGCCAACTGGAATAACAGTTTTGGTGAAGAGGATTGAGTGGGAAAAGAGCAACATTAAGGTGGTATCAGAGTTTATAATGCAACTAGGAAATGCAAGGCACAAGAATTTGATCAGATTACTTGGGTTTTGTTACAACCAGAATCTAGCTTATATTCTATATGACTACTTACCCAATGGAAACTTGGCAGAGAAAATTGGGATGAAAAGGGATTGGGCAGCTAAATTCAGAATTGTGATTGGCATTGCCAAGGGACTTTGCTTTCTTCACCATGACTGTTACCCAGCCATGCCCCATGGAGACTTGAAATCTAGCAATGTAGTGTTTGATGAAAATATGGAACCCCACTTGGCAGAATTTGGCCTCAAACATGTGCTGAAGTTGAGCAAAGGTTCATCTCTTGCCACAACTTCTAGCTGGGAACCAGTTAGACAATTACTCAAACATTTGCCAATCATTCTTACAACATGCTATGGAGAGAAAGTAGGCGTAAATAGTGATCATGGTCTATTCTTTAACAGCAGAATACAATGA 2688 0.4126 MEIFRCFYFNILLLATFSIFFLAVSATDPYSEALLSLKSELVDEEDSLRDWVVVTSGGNSTGKSNAYCSWSGIKCGNNSKTVTLIDLSMKKLGGAMSGKQFSVFTELEYLNLSHNFFSGQLPVEIFNLTILRSLDISRNNFSGHFPGGISRLKNLLVLDAFSNSFSGPLPAELSELENLKVLNLAGSYFKGPIPSEYGSFRSLEFLHLAGNLLSGNLPPELGNLKTVTHMEIGYNSYQGFIPFELGNMSELRYLDIAGANLSGPIPKQLSNLTNLKSLYLFRNQLVGTIPSEFSKIKSLTDLDLSDNLISGPIPESFSKLESLSLLSLMYNDMNGTVPEGIAQLPNLETLLIWSNDFSGLLPQSLGKNSNLMWVDVSTNNFVGSIPPDICNRGVLHKLILFSNRFSGSLSPSLSNCSSLVRLRLEDNLFTGHIPLKFRHLPDISYVDISRNKFLGGIPSDISQAIKLTYFNVSNNPLLGGTIPAQTWSLPLLQNFSASSCRISGNLPQFESCKSVSSIELDRNNLSGVIPFTVSNCQNLESIKLSSNNLSGPIPEQLASIPVLGVVDLSHNNLNGPIPAKFSASSSLQLLNVSFNYISGSIPKGNLFRFMDNSAFVGNPELCGAPLQPCSGSVGILGSKGTWKLTSIVLLCAGLLIFLVAALSFGIVYFRRGVKSQWKMISFIGLPQFTANDVLTSFNTTESREGVAKTPSPSVSKAVLPTGITVLVKRIEWEKSNIKVVSEFIMQLGNARHKNLIRLLGFCYNQNLAYILYDYLPNGNLAEKIGMKRDWAAKFRIVIGIAKGLCFLHHDCYPAMPHGDLKSSNVVFDENMEPHLAEFGLKHVLKLSKGSSLATTSSWEPVRQLLKHLPIILTTCYGEKVGVNSDHGLFFNSRIQ 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1154 895 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Prci9g1154 895 SUPERFAMILY Protein kinase-like (PK-like) 679 850 IPR011009 -
Prci9g1154 895 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 395 849 - -
Prci9g1154 895 FunFam Leucine-rich repeat receptor-like protein kinase 27 194 - -
Prci9g1154 895 FunFam Leucine-rich repeat receptor-like protein kinase TDR 195 298 - -
Prci9g1154 895 SUPERFAMILY RNI-like 85 406 - -
Prci9g1154 895 SMART LRR_typ_2 104 128 IPR003591 -
Prci9g1154 895 SMART LRR_typ_2 272 295 IPR003591 -
Prci9g1154 895 SMART LRR_typ_2 296 319 IPR003591 -
Prci9g1154 895 SMART LRR_typ_2 344 367 IPR003591 -
Prci9g1154 895 SMART LRR_typ_2 200 224 IPR003591 -
Prci9g1154 895 FunFam Leucine-rich repeat receptor-like protein kinase TDR 317 631 - -
Prci9g1154 895 ProSiteProfiles Protein kinase domain profile. 677 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1154 895 Pfam Leucine rich repeat 514 573 IPR001611 GO:0005515
Prci9g1154 895 Pfam Leucine rich repeat 273 332 IPR001611 GO:0005515
Prci9g1154 895 Gene3D Ribonuclease Inhibitor 317 633 IPR032675 -
Prci9g1154 895 Pfam Protein kinase domain 714 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1154 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Prci9g1154 895 Gene3D Transferase(Phosphotransferase) domain 1 696 866 - -
Prci9g1154 895 FunFam Leucine-rich repeat receptor-like protein kinase TDR 688 774 - -
Prci9g1154 895 SUPERFAMILY L domain-like 313 628 - -
Prci9g1154 895 Gene3D Ribonuclease Inhibitor 30 316 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1154 Prci-Chr9 25652291 25655484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1154 19 846 Receptor kinase-like Gene Family AT5G51350 57.109 0.0 896
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci9g1154 Pkinase 1.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1154 - - aprc:113852384 1254.2