Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1153 ATGGAGATTTTTAGATGTTTTTACTTCAATATCCTTCTTCTTGCCACTTTTTCCATTTTCTTCTTGGCAGTTTCAGCAACGGACCCTTATTCAGAGGCGCTTCTTAGTCTGAAATCTGAACTTGTGGATGAAGAAGACAGTTTACGTGACTGGGTGGTCGTGACTTCTGGAGGAAACTCAACTGGGAAATCCAATGCTTATTGTTCTTGGTCTGGAATCAAGTGTGGTAACAACTCAAAAACTGTAACCTTGATAGACTTATCCATGAAGAAACTGGGAGGTGCAATGTCAGGGAAGCAATTCAGTGTGTTCACAGAGCTTGAATATCTCAATCTCAGCCACAATTTCTTCTCTGGGCAACTTCCTGTGGAAATTTTCAACCTCACCATTCTAAGAAGCTTGGATATAAGCAGAAACAACTTTTCTGGTCACTTTCCAGGTGGGATTTCCAGACTTAAAAACTTGCTTGTACTTGACGCCTTTAGCAACAGCTTTTCCGGGCCATTGCCTGCTGAACTTTCTGAACTTGAAAATCTCAAGGTCCTTAATCTTGCTGGGAGTTACTTCAAAGGACCAATCCCATCTGAATATGGTTCCTTTAGAAGCCTTGAGTTTCTTCATCTTGCAGGAAATCTTCTCTCCGGGAATCTACCTCCAGAATTGGGTAATCTCAAAACAGTAACCCACATGGAAATCGGCTACAATTCCTACCAGGGTTTCATTCCATTTGAGTTAGGTAACATGAGTGAACTAAGGTATCTAGATATTGCTGGTGCAAATCTATCTGGCCCAATACCAAAGCAACTCTCCAACCTCACCAATTTGAAGTCACTTTATCTGTTCAGAAACCAGCTCGTGGGAACAATTCCAAGCGAGTTTAGCAAGATCAAGTCACTCACAGATTTAGATCTTTCTGACAATCTCATTTCTGGGCCCATTCCTGAAAGCTTCTCAAAGTTGGAGAGCCTGAGCCTGCTCAGCCTCATGTACAATGACATGAATGGAACTGTCCCTGAAGGCATTGCACAACTTCCAAACTTGGAAACTCTTCTTATTTGGAGCAATGACTTCTCTGGGTTACTTCCACAGAGCTTGGGCAAGAACTCAAATCTCATGTGGGTGGATGTTTCCACAAACAATTTTGTAGGCAGTATACCACCAGACATTTGTAACAGAGGAGTGCTACATAAGCTGATCCTGTTTTCAAACAGATTCTCCGGCAGCCTCTCACCATCTCTCTCGAATTGTTCTTCACTTGTTCGTCTTCGCCTGGAAGATAACTTGTTCACAGGGCATATCCCTTTGAAATTCAGACATCTTCCTGATATATCATATGTTGACATATCCAGGAATAAATTTCTTGGTGGAATCCCCTCAGATATTTCCCAAGCTATCAAGCTTACTTATTTCAATGTTTCCAATAATCCACTATTAGGAGGCACCATCCCTGCACAAACATGGTCTTTACCACTTCTGCAAAATTTTTCAGCCTCTTCCTGTCGTATTTCAGGAAATCTTCCCCAATTTGAGTCCTGCAAATCAGTCTCTAGCATTGAACTTGATAGGAACAACTTGTCTGGAGTGATCCCATTTACTGTCTCAAATTGCCAAAATCTTGAGAGTATAAAATTATCCAGTAATAATTTATCTGGTCCTATACCTGAGCAGCTTGCAAGCATTCCCGTTCTTGGTGTTGTAGACCTATCACACAATAACCTCAACGGCCCTATACCTGCAAAGTTCAGTGCTTCTTCAAGTTTACAACTTCTTAACGTGTCTTTCAACTACATCTCCGGTTCGATTCCCAAAGGAAACTTGTTCAGATTCATGGATAACAGTGCATTTGTTGGGAATCCAGAGCTATGTGGGGCACCTCTACAGCCATGTTCGGGTTCAGTTGGAATATTGGGAAGTAAAGGCACATGGAAGCTTACAAGTATAGTGCTACTGTGTGCTGGATTGCTTATATTCCTTGTTGCAGCATTATCTTTTGGAATAGTTTATTTCAGGCGAGGAGTTAAAAGCCAATGGAAGATGATCTCATTTATTGGGCTCCCTCAGTTCACAGCAAATGATGTTTTGACAAGCTTCAATACCACAGAATCAAGAGAAGGAGTGGCAAAAACACCATCACCGTCAGTTTCAAAAGCTGTTCTGCCAACTGGAATAACAGTTTTGGTGAAGAGGATTGAGTGGGAAAAGAGCAACATTAAGGTGGTATCAGAGTTTATAATGCAACTAGGAAATGCAAGGCACAAGAATTTGATCAGATTACTTGGGTTTTGTTACAACCAGAATCTAGCTTATATTCTATATGACTACTTACCCAATGGAAACTTGGCAGAGAAAATTGGGATGAAAAGGGATTGGGCAGCTAAATTCAGAATTGTGATTGGCATTGCCAAGGGACTTTGCTTTCTTCACCATGACTGTTACCCAGCCATGCCCCATGGAGACTTGAAATCTAGCAATGTAGTGTTTGATGAAAATATGGAACCCCACTTGGCAGAATTTGGCCTCAAACATGTGCTGAAGTTGAGCAAAGGTTCATCTCTTGCCACAACTTCTAGCTGGGAACCAGCAGAATACAATGAAGCCATGAAAGATGAATTCTACGCTGATGTCTACAAATTTGGAGAGATGATTCTGGAGATTTTAACTAATGGAAGGCTGACAAATGCAGCAGCTAGCATACACGGCAAACCAAAAGATGTTCTTTTGGGAGAAATTTACGATGAAAATGAAGTGGGTTCTGCCACTTCACCGCAAGAGATAAAACTGGTTCTTGAAGTGGCTTTACTTTGCACCAGAAGCAAGCCATCTGATCGCCCATCCATGGAAGAGGCCTTGACGCTTTTGTCAGGGTCAAAGCCTCCAGAAGATCGCAAATATTAA 2895 0.4166 MEIFRCFYFNILLLATFSIFFLAVSATDPYSEALLSLKSELVDEEDSLRDWVVVTSGGNSTGKSNAYCSWSGIKCGNNSKTVTLIDLSMKKLGGAMSGKQFSVFTELEYLNLSHNFFSGQLPVEIFNLTILRSLDISRNNFSGHFPGGISRLKNLLVLDAFSNSFSGPLPAELSELENLKVLNLAGSYFKGPIPSEYGSFRSLEFLHLAGNLLSGNLPPELGNLKTVTHMEIGYNSYQGFIPFELGNMSELRYLDIAGANLSGPIPKQLSNLTNLKSLYLFRNQLVGTIPSEFSKIKSLTDLDLSDNLISGPIPESFSKLESLSLLSLMYNDMNGTVPEGIAQLPNLETLLIWSNDFSGLLPQSLGKNSNLMWVDVSTNNFVGSIPPDICNRGVLHKLILFSNRFSGSLSPSLSNCSSLVRLRLEDNLFTGHIPLKFRHLPDISYVDISRNKFLGGIPSDISQAIKLTYFNVSNNPLLGGTIPAQTWSLPLLQNFSASSCRISGNLPQFESCKSVSSIELDRNNLSGVIPFTVSNCQNLESIKLSSNNLSGPIPEQLASIPVLGVVDLSHNNLNGPIPAKFSASSSLQLLNVSFNYISGSIPKGNLFRFMDNSAFVGNPELCGAPLQPCSGSVGILGSKGTWKLTSIVLLCAGLLIFLVAALSFGIVYFRRGVKSQWKMISFIGLPQFTANDVLTSFNTTESREGVAKTPSPSVSKAVLPTGITVLVKRIEWEKSNIKVVSEFIMQLGNARHKNLIRLLGFCYNQNLAYILYDYLPNGNLAEKIGMKRDWAAKFRIVIGIAKGLCFLHHDCYPAMPHGDLKSSNVVFDENMEPHLAEFGLKHVLKLSKGSSLATTSSWEPAEYNEAMKDEFYADVYKFGEMILEILTNGRLTNAAASIHGKPKDVLLGEIYDENEVGSATSPQEIKLVLEVALLCTRSKPSDRPSMEEALTLLSGSKPPEDRKY 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1153 964 Gene3D Transferase(Phosphotransferase) domain 1 773 962 - -
Prci9g1153 964 Gene3D Phosphorylase Kinase; domain 1 672 772 - -
Prci9g1153 964 Gene3D Ribonuclease Inhibitor 193 287 IPR032675 -
Prci9g1153 964 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 396 954 - -
Prci9g1153 964 SUPERFAMILY RNI-like 85 406 - -
Prci9g1153 964 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Prci9g1153 964 ProSiteProfiles Protein kinase domain profile. 677 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1153 964 SMART serkin_6 688 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1153 964 SMART LRR_typ_2 104 128 IPR003591 -
Prci9g1153 964 SMART LRR_typ_2 272 295 IPR003591 -
Prci9g1153 964 SMART LRR_typ_2 296 319 IPR003591 -
Prci9g1153 964 SMART LRR_typ_2 344 367 IPR003591 -
Prci9g1153 964 SMART LRR_typ_2 200 224 IPR003591 -
Prci9g1153 964 FunFam Leucine-rich repeat receptor-like protein kinase TDR 775 961 - -
Prci9g1153 964 FunFam Leucine-rich repeat receptor-like protein kinase TDR 688 774 - -
Prci9g1153 964 Pfam Leucine rich repeat 514 573 IPR001611 GO:0005515
Prci9g1153 964 Pfam Leucine rich repeat 273 332 IPR001611 GO:0005515
Prci9g1153 964 MobiDBLite consensus disorder prediction 940 964 - -
Prci9g1153 964 SUPERFAMILY Protein kinase-like (PK-like) 679 953 IPR011009 -
Prci9g1153 964 FunFam Leucine-rich repeat receptor-like protein kinase 27 194 - -
Prci9g1153 964 SUPERFAMILY L domain-like 313 628 - -
Prci9g1153 964 FunFam Leucine-rich repeat receptor-like protein kinase TDR 317 631 - -
Prci9g1153 964 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Prci9g1153 964 Gene3D Ribonuclease Inhibitor 512 630 IPR032675 -
Prci9g1153 964 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Prci9g1153 964 Gene3D Ribonuclease Inhibitor 392 511 IPR032675 -
Prci9g1153 964 Gene3D Ribonuclease Inhibitor 288 391 IPR032675 -
Prci9g1153 964 Pfam Protein tyrosine and serine/threonine kinase 721 950 IPR001245 GO:0004672|GO:0006468
Prci9g1153 964 FunFam Leucine-rich repeat receptor-like protein kinase TDR 195 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1153 Prci-Chr9 25651853 25655470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1153 19 957 Receptor kinase-like Gene Family AT5G51350 56.105 0.0 987
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci9g1153 PK_Tyr_Ser-Thr 1.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1153 - - aprc:113852384 1384.01