Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1152 ATGGAGATTTTTAGATGTTTTTACTTCAATATCCTTCTTCTTGCCACTTTTTCCATTTTCTTCTTGGCAGTTTCAGCAACGGACCCTTATTCAGAGGCGCTTCTTAGTCTGAAATCTGAACTTGTGGATGAAGAAGACAGTTTACGTGACTGGGTGGTCGTGACTTCTGGAGGAAACTCAACTGGGAAATCCAATGCTTATTGTTCTTGGTCTGGAATCAAGTGTGGTAACAACTCAAAAACTGTAACCTTGATAGACTTATCCATGAAGAAACTGGGAGGTGCAATGTCAGGGAAGCAATTCAGTGTGTTCACAGAGCTTGAATATCTCAATCTCAGCCACAATTTCTTCTCTGGGCAACTTCCTGTGGAAATTTTCAACCTCACCATTCTAAGAAGCTTGGATATAAGCAGAAACAACTTTTCTGGTCACTTTCCAGGTGGGATTTCCAGACTTAAAAACTTGCTTGTACTTGACGCCTTTAGCAACAGCTTTTCCGGGCCATTGCCTGCTGAACTTTCTGAACTTGAAAATCTCAAGGTCCTTAATCTTGCTGGGAGTTACTTCAAAGGACCAATCCCATCTGAATATGGTTCCTTTAGAAGCCTTGAGTTTCTTCATCTTGCAGGAAATCTTCTCTCCGGGAATCTACCTCCAGAATTGGGTAATCTCAAAACAGTAACCCACATGGAAATCGGCTACAATTCCTACCAGGGTTTCATTCCATTTGAGTTAGGTAACATGAGTGAACTAAGGTATCTAGATATTGCTGGTGCAAATCTATCTGGCCCAATACCAAAGCAACTCTCCAACCTCACCAATTTGAAGTCACTTTATCTGTTCAGAAACCAGCTCGTGGGAACAATTCCAAGCGAGTTTAGCAAGATCAAGTCACTCACAGATTTAGATCTTTCTGACAATCTCATTTCTGGGCCCATTCCTGAAAGCTTCTCAAAGTTGGAGAGCCTGAGCCTGCTCAGCCTCATGTACAATGACATGAATGGAACTGTCCCTGAAGGCATTGCACAACTTCCAAACTTGGAAACTCTTCTTATTTGGAGCAATGACTTCTCTGGGTTACTTCCACAGAGCTTGGGCAAGAACTCAAATCTCATGTGGGTGGATGTTTCCACAAACAATTTTGTAGGCAGTATACCACCAGACATTTGTAACAGAGGAGTGCTACATAAGCTGATCCTGTTTTCAAACAGATTCTCCGGCAGCCTCTCACCATCTCTCTCGAATTGTTCTTCACTTGTTCGTCTTCGCCTGGAAGATAACTTGTTCACAGGGCATATCCCTTTGAAATTCAGACATCTTCCTGATATATCATATGTTGACATATCCAGGAATAAATTTCTTGGTGGAATCCCCTCAGATATTTCCCAAGCTATCAAGCTTACTTATTTCAATGTTTCCAATAATCCACTATTAGGAGGCACCATCCCTGCACAAACATGGTCTTTACCACTTCTGCAAAATTTTTCAGCCTCTTCCTGTCGTATTTCAGGAAATCTTCCCCAATTTGAGTCCTGCAAATCAGTCTCTAGCATTGAACTTGATAGGAACAACTTGTCTGGAGTGATCCCATTTACTGTCTCAAATTGCCAAAATCTTGAGAGTATAAAATTATCCAGTAATAATTTATCTGGTCCTATACCTGAGCAGCTTGCAAGCATTCCCGTTCTTGGTGTTGTAGACCTATCACACAATAACCTCAACGGCCCTATACCTGCAAAGTTCAGTGCTTCTTCAAGTTTACAACTTCTTAACGTGTCTTTCAACTACATCTCCGGTTCGATTCCCAAAGGAAACTTGTTCAGATTCATGGATAACAGTGCATTTGTTGGGAATCCAGAGCTATGTGGGGCACCTCTACAGCCATGTTCGGGTTCAGTTGGAATATTGGGAAGTAAAGGCACATGGAAGCTTACAAGTATAGTGCTACTGTGTGCTGGATTGCTTATATTCCTTGTTGCAGCATTATCTTTTGGAATAGTTTATTTCAGGCGAGGAGTTAAAAGCCAATGGAAGATGATCTCATTTATTGGGCTCCCTCAGTTCACAGCAAATGATGTTTTGACAAGCTTCAATACCACAGAATCAAGAGAAGGAGTGGCAAAAACACCATCACCGTCAGTTTCAAAAGCTGTTCTGCCAACTGGAATAACAGTTTTGGTGAAGAGGATTGAGTGGGAAAAGAGCAACATTAAGGTGGTATCAGAGTTTATAATGCAACTAGGAAATGCAAGGCACAAGAATTTGATCAGATTACTTGGGTTTTGTTACAACCAGAATCTAGCTTATATTCTATATGACTACTTACCCAATGGAAACTTGGCAGAGAAAATTGGGATGAAAAGGGATTGGGCAGCTAAATTCAGAATTGTGATTGGCATTGCCAAGGGACTTTGCTTTCTTCACCATGACTGTTACCCAGCCATGCCCCATGGAGACTTGAAATCTAGCAATGTAGTGTTTGATGAAAATATGGAACCCCACTTGGCAGAATTTGGCCTCAAACATGTGCTGAAGTTGAGCAAAGGTTCATCTCTTGCCACAACTTCTAGCTGGGAACCAGAATACAATGAAGCCATGAAAGATGAATTCTACGCTGATGTCTACAAATTTGGAGAGATGATTCTGGAGATTTTAACTAATGGAAGGCTGACAAATGCAGCAGCTAGCATACACGGCAAACCAAAAGATGTTCTTTTGGGAGAAATTTACGATGAAAATGAAGTGGGTTCTGCCACTTCACCGCAAGAGATAAAACTGGTTCTTGAAGTGGCTTTACTTTGCACCAGAAGCAAGCCATCTGATCGCCCATCCATGGAAGAGGCCTTGACGCTTTTGTCAGGGTCAAAGCCTCCAGAAGATCGCAAATATTAA 2892 0.4163 MEIFRCFYFNILLLATFSIFFLAVSATDPYSEALLSLKSELVDEEDSLRDWVVVTSGGNSTGKSNAYCSWSGIKCGNNSKTVTLIDLSMKKLGGAMSGKQFSVFTELEYLNLSHNFFSGQLPVEIFNLTILRSLDISRNNFSGHFPGGISRLKNLLVLDAFSNSFSGPLPAELSELENLKVLNLAGSYFKGPIPSEYGSFRSLEFLHLAGNLLSGNLPPELGNLKTVTHMEIGYNSYQGFIPFELGNMSELRYLDIAGANLSGPIPKQLSNLTNLKSLYLFRNQLVGTIPSEFSKIKSLTDLDLSDNLISGPIPESFSKLESLSLLSLMYNDMNGTVPEGIAQLPNLETLLIWSNDFSGLLPQSLGKNSNLMWVDVSTNNFVGSIPPDICNRGVLHKLILFSNRFSGSLSPSLSNCSSLVRLRLEDNLFTGHIPLKFRHLPDISYVDISRNKFLGGIPSDISQAIKLTYFNVSNNPLLGGTIPAQTWSLPLLQNFSASSCRISGNLPQFESCKSVSSIELDRNNLSGVIPFTVSNCQNLESIKLSSNNLSGPIPEQLASIPVLGVVDLSHNNLNGPIPAKFSASSSLQLLNVSFNYISGSIPKGNLFRFMDNSAFVGNPELCGAPLQPCSGSVGILGSKGTWKLTSIVLLCAGLLIFLVAALSFGIVYFRRGVKSQWKMISFIGLPQFTANDVLTSFNTTESREGVAKTPSPSVSKAVLPTGITVLVKRIEWEKSNIKVVSEFIMQLGNARHKNLIRLLGFCYNQNLAYILYDYLPNGNLAEKIGMKRDWAAKFRIVIGIAKGLCFLHHDCYPAMPHGDLKSSNVVFDENMEPHLAEFGLKHVLKLSKGSSLATTSSWEPEYNEAMKDEFYADVYKFGEMILEILTNGRLTNAAASIHGKPKDVLLGEIYDENEVGSATSPQEIKLVLEVALLCTRSKPSDRPSMEEALTLLSGSKPPEDRKY 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1152 963 Gene3D Ribonuclease Inhibitor 194 290 IPR032675 -
Prci9g1152 963 FunFam Leucine-rich repeat receptor-like protein kinase TDR 775 960 - -
Prci9g1152 963 Gene3D Phosphorylase Kinase; domain 1 672 772 - -
Prci9g1152 963 Pfam Protein tyrosine and serine/threonine kinase 721 949 IPR001245 GO:0004672|GO:0006468
Prci9g1152 963 SUPERFAMILY RNI-like 85 406 - -
Prci9g1152 963 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Prci9g1152 963 SMART LRR_typ_2 104 128 IPR003591 -
Prci9g1152 963 SMART LRR_typ_2 272 295 IPR003591 -
Prci9g1152 963 SMART LRR_typ_2 296 319 IPR003591 -
Prci9g1152 963 SMART LRR_typ_2 344 367 IPR003591 -
Prci9g1152 963 SMART LRR_typ_2 200 224 IPR003591 -
Prci9g1152 963 FunFam Leucine-rich repeat receptor-like protein kinase TDR 688 774 - -
Prci9g1152 963 Pfam Leucine rich repeat 514 573 IPR001611 GO:0005515
Prci9g1152 963 Pfam Leucine rich repeat 273 332 IPR001611 GO:0005515
Prci9g1152 963 SUPERFAMILY L domain-like 313 628 - -
Prci9g1152 963 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 347 953 - -
Prci9g1152 963 Gene3D Ribonuclease Inhibitor 291 382 IPR032675 -
Prci9g1152 963 FunFam Leucine-rich repeat receptor-like protein kinase 27 194 - -
Prci9g1152 963 SUPERFAMILY Protein kinase-like (PK-like) 679 952 IPR011009 -
Prci9g1152 963 MobiDBLite consensus disorder prediction 939 963 - -
Prci9g1152 963 Gene3D Transferase(Phosphotransferase) domain 1 773 961 - -
Prci9g1152 963 SMART serkin_6 688 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1152 963 FunFam Leucine-rich repeat receptor-like protein kinase TDR 317 631 - -
Prci9g1152 963 Gene3D Ribonuclease Inhibitor 30 193 IPR032675 -
Prci9g1152 963 ProSiteProfiles Protein kinase domain profile. 677 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1152 963 Gene3D Ribonuclease Inhibitor 383 633 IPR032675 -
Prci9g1152 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Prci9g1152 963 FunFam Leucine-rich repeat receptor-like protein kinase TDR 195 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1152 Prci-Chr9 25651853 25655471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1152 19 956 Receptor kinase-like Gene Family AT5G51350 56.164 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci9g1152 PK_Tyr_Ser-Thr 2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1152 - - aprc:113852384 1388.24