Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1147 ATGTTAAAACTAGGGCTACAGCTTTCGGTGTTCAGCTTCCGCAGCTGCTGGTTTATCGTCATCGATCTTCTCCAGCCGAAAATGCCTTCACACAAGACCTTCAGGATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAATAGGCCCATTCCTTACTGGATTCGAATGAGGACTGACAACACCATCAGGTATAATGCTAAGCGCAGGCACTGGCGCCGCACGAAGCTCGGGTTTTAA 237 0.4937 MLKLGLQLSVFSFRSCWFIVIDLLQPKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1147 78 SUPERFAMILY Ribosomal protein L39e 30 77 IPR023626 -
Prci9g1147 78 Gene3D Ribosomal protein L39e 28 78 IPR023626 -
Prci9g1147 78 FunFam 60S ribosomal protein-like L39 28 78 - -
Prci9g1147 78 Pfam Ribosomal L39 protein 36 76 IPR000077 GO:0003735|GO:0005840|GO:0006412
Prci9g1147 78 PANTHER RIBOSOMAL PROTEIN L39E 20 78 - -
Prci9g1147 78 Hamap 50S ribosomal protein L39e [rpl39e]. 28 78 IPR000077 GO:0003735|GO:0005840|GO:0006412
Prci9g1147 78 ProSitePatterns Ribosomal protein L39e signature. 57 73 IPR020083 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1147 Prci-Chr9 25625411 25626081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1147 28 78 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 90.196 2.02e-29 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1147 K02924 - gmx:100779071 112.849