Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1143 ATGATTCCGGTGGACCAAAGTTGTAATTTGGGTGATGACAATGGGACCACAAAAAAGTTTCCTGTGGGCATGAGTGTTCTGGCTGTTGACGACGACCCAATTTGTCTCAAAGTATTGGAGACTCTGCTTGTCAAATGCGAGTATCAGGTTACTACAACTAATCAGGCGGTTAAGGCTTTGAAACTGTTGAGGGAAAACAGAAACAAGTTTGACCTCGTCATTAGTGATGTAAGTATGCCAGACATGGATGGATTTAAGCTCCTTGAGCTAGTGGGACTTGAAATGGACCTGCCAGTCATCATGTTGTCCGCTTATAGTGATACAAGGCTTGTGATGAAGGGTGTTACCCATGGTGCTTGTGACTATTTACTGAAACCTGTTAGACTGGAAGAGCTTAAGAACATATGGCAGCATGTGGTTCGAAGAAAGAAGTTTGATGGCAAGGATCAGAATAAGGCTTCCCAGGTGGAAAAGGCAAGCAATATGGCTGAGGAAGGAAATCCAGGCTACACTTCAGAAAATAATTCTGATCAAAGTAAAAAGCTGGGTAAAAGGAGGAAGGACCAAGGTGAGGATGAGGAAGAAGATGGTGAAGACAATGCACAAGAGAACGAGGAGGACCCATCAACACAGAAGAAGCCGCGTGTCGTTTGGTCAGTCGAGCTGCACCGGAAATTTGTTGCTGCAGTTGATCAGCTTGGTCTTGAAAAGGCTGTTCCGAAGAAAATTCTTGACCTGATGAATGTTGATGGGCTTACAAGGGAAAATGTGGCAAGCCATCTACAGAAATACAGGCTCTATCTTAAAAAGGCAACTCAACAAGCTAAAATTGTTGCTGCGTTGGGTGGTGATTCATCATACTTGCGGATGGGTTCATTGGAAGGATATGGAGAATTTCGCTCCTTGTCTGGCACTGGACGGCTCTCATCAACATTTGCATCTACTGGAATTTTAAGTAGACTGAACTCTCCAACTGGTTTGAACTTGAGAGGAATAGGTTCTTCTGGACTGATCCAGCCTGGTCAGTCTCAAAACTCAAGCTTGGCCACAAACACACTTGGAAATCTTCAGCCATCATCTATCTTGTCTGCAAACTCAAGTCTATTTCAAAGCATCCCAACACCAATAGAATTTAGTCAATCTCAACGTAGCAACTGTGCCACTGGTATTAGGCAATTAAGTTCAATGGATGATTCAGGTGGTTTTGCAGCTGGATTCCTAGACAGTAGAGCTACTGTTGGTAGTGCAAGCAATTCGGTACCGTGTGTCTCAAGCAATCATTTGATGTTAGCCGGAAGCTCACAACAATCTCAAAATGTGGGAGATTTCAGAAACCAATCTTCTTTTGGAGCTGCTCCTTTGAACTCAGAAACTCTAGACATTTGTGGTTCCAATTTGTTGGACCATGCACGATGCAATGAAAGTTGGCAGGGTGCTGTTCAGTTATCTAAATTTCCCTCTAATTCTTTGCCACTAAATGAGACTTTCACTAATGATCAGCTGCCTTCTAGCAGCTTAAATGTTTCTTCCTCCAACACTTACATCAGAAACAATGCAGTGGATTTTTCCTCTGCTGTTCCGCTGGATGATCTTAGAGGTCAACTACAAAGTCAAGATGGTTTGATTGGGAATGTGGTTCAGTCTTCAAGTTACGCGTCAAGGCAGAACTGGGAACTGCATAAGCAGGACTACAACCAAAACATGAACTGCAATTTCAATATTGTGAATTCACTGGTTTCTTCTAATGAAGTCACAAGTACCTTGGGGCAGAGTTTAAATCAAAATAATTCAACTTGCAGCAGGAGGGTGGATGCATCGTTCATGGACCAATTCTATGTGGCTACCCCATCAATCTCTCAGCTTAACGAGGATGAGAGGTTCTCTTCAGATGTGAGAATGAAATCTACTGATGCATACATGATGGAGCAGATGAAGTCCCAAGATGGTTTCATTCGCGATATTGGATATTTAGATGACATAATGGGTGCAATGGTTAAACGGGAGCAAAATGAGATGATAATGATGGATGGAGAGGCGCGATTCGATGCTTACCCGATTGGATCTTGTATCTGA 2073 0.4298 MIPVDQSCNLGDDNGTTKKFPVGMSVLAVDDDPICLKVLETLLVKCEYQVTTTNQAVKALKLLRENRNKFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSAYSDTRLVMKGVTHGACDYLLKPVRLEELKNIWQHVVRRKKFDGKDQNKASQVEKASNMAEEGNPGYTSENNSDQSKKLGKRRKDQGEDEEEDGEDNAQENEEDPSTQKKPRVVWSVELHRKFVAAVDQLGLEKAVPKKILDLMNVDGLTRENVASHLQKYRLYLKKATQQAKIVAALGGDSSYLRMGSLEGYGEFRSLSGTGRLSSTFASTGILSRLNSPTGLNLRGIGSSGLIQPGQSQNSSLATNTLGNLQPSSILSANSSLFQSIPTPIEFSQSQRSNCATGIRQLSSMDDSGGFAAGFLDSRATVGSASNSVPCVSSNHLMLAGSSQQSQNVGDFRNQSSFGAAPLNSETLDICGSNLLDHARCNESWQGAVQLSKFPSNSLPLNETFTNDQLPSSSLNVSSSNTYIRNNAVDFSSAVPLDDLRGQLQSQDGLIGNVVQSSSYASRQNWELHKQDYNQNMNCNFNIVNSLVSSNEVTSTLGQSLNQNNSTCSRRVDASFMDQFYVATPSISQLNEDERFSSDVRMKSTDAYMMEQMKSQDGFIRDIGYLDDIMGAMVKREQNEMIMMDGEARFDAYPIGSCI 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1143 690 FunFam Two-component response regulator 209 272 - -
Prci9g1143 690 Gene3D - 209 271 - -
Prci9g1143 690 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Prci9g1143 690 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Prci9g1143 690 MobiDBLite consensus disorder prediction 147 214 - -
Prci9g1143 690 SUPERFAMILY Homeodomain-like 210 270 IPR009057 -
Prci9g1143 690 Pfam Myb-like DNA-binding domain 215 265 IPR001005 -
Prci9g1143 690 PIRSF RR_ARR_type-B 7 671 IPR017053 GO:0003677|GO:0003700|GO:0009736
Prci9g1143 690 SUPERFAMILY CheY-like 23 147 IPR011006 -
Prci9g1143 690 CDD REC_typeB_ARR-like 26 140 - -
Prci9g1143 690 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 392 IPR045279 GO:0009736
Prci9g1143 690 Gene3D - 24 161 - -
Prci9g1143 690 SMART REC_2 24 136 IPR001789 GO:0000160
Prci9g1143 690 NCBIfam myb-like DNA-binding domain, SHAQKYF class 213 266 IPR006447 GO:0003677
Prci9g1143 690 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 210 269 IPR017930 -
Prci9g1143 690 MobiDBLite consensus disorder prediction 154 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1143 Prci-Chr9 25586563 25590389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1143 13 685 Response Regulator Gene Family AT5G58080 40.346 7.18e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Prci9g1143 Response_reg 3.4e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1143 K14491 - gmx:100776075 891.723