Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1128 ATGACTATGCAGCCCAGCACCACCGAAATGCAACAGGGAATCAACTCTTCCTCCTCCTCCTCCATGAACTCTTCTCAAATCCCTCTTCACGACCAGGTCCCACAACCTGACCTTCACGACGATTTCCTCGACCAAATGCTCTCCAACCTTCCTTCTTGCTCCTGGCCTGACCTCAACCCCAAGCCCTTCTGGGACCACCCTCTCAATCCCTCCTCCTCCTCCGCCGCCGATGACGACCACAATAATGCCGCCGCTTTCCACTTCGATGACAAGTTTCGCAACCACCAGATCCCTCCCACCTCCGCTCCCGCTCCCAAGTCCATCACCGCCGAGGCCGTGGCTTTGATGCTTCAGCGCCAGCTTCTCACGTCCAGAGCTGCCGCCGATTCTAGCCTTCTTCAGATGCCCTTGTCTCTCGGTGCAGGGGGAAACTTCGACCCTTCCCGTAACGACGTCGGTGATGGTTCCTCCTTCAAATCTCATATTCCGGCCGGCGAGGGTACCGTCCAATCTCTGTACAACGGGTTCGCCGGATCTATGCACGACGCCCATCAAGCTTCCAACCAGTCCCAACATTTCCATCATCCTCAGAATTATGGAGCATCAGGCACGCCATCGACGAACCAGGCCCCGACGAACGGAGCTCCGGCACAGCCGAAGCAGAGGGTCAGGGCAAGGAGAGGTCAAGCGACGGACCCACACAGCATCGCGGAGAGGCTGCGAAGGGAGAGAATCGCAGAGAGAATGAAGGCCCTGCAGGAACTGGTTCCAAATGCCAACAAGACAGACAAGGCCTCAATGCTGGACGAGATAATAGACTATGTCAAGTTCTTACAGCTCCAAGTTAAGGTTCTGAGCATGAGCAGATTGGGCGGTGCTGCTGCTGTTGCTCCTCTTGTTGCTGATATCTCCTCTGAGGGAGGTGATTGCATCCAGTCCACCGCCGCTCGCAACTCGAACGGCAACCAAACGGCGTCGTCCTCCAACGACACCCTGGCCCTGACGGAGCACCAGGTGGCCAAGCTCATGGAGGAAGACATGGGCTCCGCCATGCAGTACCTCCAGGGGAAAGGTCTCTGCCTCATGCCAATCTCCCTCGCCACCGCCATCTCCACCGCCACGTGTCACTCCCGGAACCCCTTGGTCCCCACCGCTACCAACCACCATCCCGCCGCAGCGTCCAACGGCAACGGGGTGGAAGGGCCATCCTCTCCCAGCATGTCCGTGTTGACCCTCCAGTCCACCGCTACTGCGGTTAATGACGGCGCCGTTAAAGACGCGGCCTCCGTTTCGAAGCCGTGA 1302 0.5845 MTMQPSTTEMQQGINSSSSSSMNSSQIPLHDQVPQPDLHDDFLDQMLSNLPSCSWPDLNPKPFWDHPLNPSSSSAADDDHNNAAAFHFDDKFRNHQIPPTSAPAPKSITAEAVALMLQRQLLTSRAAADSSLLQMPLSLGAGGNFDPSRNDVGDGSSFKSHIPAGEGTVQSLYNGFAGSMHDAHQASNQSQHFHHPQNYGASGTPSTNQAPTNGAPAQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGDCIQSTAARNSNGNQTASSSNDTLALTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLVPTATNHHPAAASNGNGVEGPSSPSMSVLTLQSTATAVNDGAVKDAASVSKP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1128 433 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 227 289 IPR036638 GO:0046983
Prci9g1128 433 FunFam Transcription factor bHLH66 226 291 - -
Prci9g1128 433 SMART finulus 235 284 IPR011598 GO:0046983
Prci9g1128 433 MobiDBLite consensus disorder prediction 142 163 - -
Prci9g1128 433 Gene3D - 224 286 IPR036638 GO:0046983
Prci9g1128 433 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 229 278 IPR011598 GO:0046983
Prci9g1128 433 MobiDBLite consensus disorder prediction 182 236 - -
Prci9g1128 433 MobiDBLite consensus disorder prediction 182 216 - -
Prci9g1128 433 MobiDBLite consensus disorder prediction 1 31 - -
Prci9g1128 433 Pfam Helix-loop-helix DNA-binding domain 234 279 IPR011598 GO:0046983
Prci9g1128 433 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 52 370 - -
Prci9g1128 433 MobiDBLite consensus disorder prediction 381 407 - -
Prci9g1128 433 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1128 Prci-Chr9 25466744 25469948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1128 206 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 65.021 1.44e-98 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci9g1128 HLH 1.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1128 - - cave:132185902 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1128 9 25466744 25469948 Prci9g1128 9 25466744 25469948 ECH