Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci9g1100 | ATGGGTTGGGGGATATTTGGTTCAATCGTAGTTCTGACGTTTTTCTTTGAGCATTTGGCTTGCCAGCGACCAAATACTGATGATTTCTTTGTGTCTGAGTTCTTGAAGAACATGAGTGTATCATCATCTTCTTCCCAAGCCTTCAACTTCTCTGCTTCTGTTTGTTCATGGCCTGGGATTTCCTGTGATGCAAATAAAGAACATGTGGTTGAGTTGAAAGCTTCTTGTATGGGACTTTCTGGGCCTATTCCTGATAACACCATTGGCAAGCTCAGCAAGCTTCAGACTTTGGATCTTAGTAACAACAAAATCACTGCCTTGCCTTCTGATTTCTGGAGCTTAGGCTCTCTCAAGATTCTCAACCTCTCGTTCAATGAGATATCAGGTTCACTTGCGAGCAACTTTGGCAACTTCGGTCTCCTCGAAACCTTTGACTTGTCCAGCAACAATTTTTCTGGGGAAATTCCTGAAGCTATTAGCTCCCTTGTGAGTTTAAGGATCCTCAAACTTGATAAAAACAAGTTTGAGCAGAACATACCTTTTGAGATTCTACAAATTCAATCTCTAGTTTCTATTGATCTTTCACAAAATCAGCTCAATGGCACTCTTCCTGAAGGTTTTGGAGCTGCTTTTCCTAAACTTGAAAGCTTAAACCTTGCAGGGAATAATCTTCATGGTCATGATTCAGATTTTTCAGGATTGAAATCCATTACTAGTATCAACATATCTGAAAATTCCTTTCACGGTTCTGTTCTGGGTATGTTTCAGGAACAGTTGGGTGTCATTGACCTTAGCAGGAACCAGTTTGAGGGTCAGATTTCTCAGGTAAAGTTCAAGTACAATTGGTCTCATTTGGTTTATCTGGATTTGTCTGAGAATAGGCTTGGTGGGGAAATTTTCCAGTATCTGAATGAAGCCCAAAATCTTAAACACCTTAATCTAGCACACAATAGATTTGCAAGTCAGAAATTTCCACAGCTTGAAAACCTCTCGAGATTGGAATATCTGAACTTGTCCAAAGCTAATCTGCATGGCTACATTCCTGCTGAAATATCACAGCTGAGCAATCTGAATTCACTTGACATTTCTTTGAATCATCTTATAGGGGGAATTCCGTTTCTGAGAAGTGAAAACCTCCAAATTCTTGACCTTTCATACAACAATTTGAGTGGAGAAATCCCTCAACCTTTGTTGCAGAAACTCCCATCAATGGAGAAATATAACTTCTCTTATAATAACTTAACCTTCTGCTTTTTGGGAATCAACCCCAATATCCTGCGAACAGCATTCTATGGATCATCAGACAATTGCCCTCTTGCTGCAAATCCTAATCTTTTCAAAAGAACAAATGAGCGCAAGGGGATGAAGCTAGCTGTGGCATTGACCCTCTCAATGATCTGCTTACTTTCTGGCCTTTTATTTCTAGCATTTGGTTGCAGAAGGAAAACAAAGTCATGGGCAATTAAGAAAACTTCCTACAAAGAAGAGCAGAACATTTCGGGCCCCTTCTCGTTCCAGACTGATTCAACTACCTGGGTAGCTGATGTCAAGCAAGCAAACTCAGTCCCAGTTGTAATCTTTGAGAAGCCTTTACTGAACATTACATTTGCAGATCTCCTGTACTCAACTTCAAATTTTGATCGCGGTACCCTTTTGGCTGAAGGGAAGTTTGGACCTGTTTACCGAGGCTTTCTGCCCAGTGGCATTCAAGTGGCAGTTAAAGTATTGGTTGTTGGGTCCACATTGACAGATCAAGAAGCTGCAAAAGAGCTCGAGTATCTTGGTCGAATCAAGCATCCCAATCTTGTTCCCCTAACTGGATATTGCTTTGCTGGGGATCAAAGGATTGCCATATATGATCACATGGAGAATGGGAACTTGCAAAACTTTCTTCATGACTTGCCACTTGGGGCACAGAGGACAGATGATTGGAGCACAGACACACTGGAAGGAGATGACACAAATGTAATTCACAATGCTAGCTCTGAGGGATTATCACTCTCATCTTGGCAATTTCGACACAAAATTGCCCTTGGCACTGCTCGAGCATTGGCATTTCTTCACCATGGCTGCTCACCTCCAATCATTCACAGAGATGTTAAGGCTAGCAGTGTCTACTTGGACTACAACTTGGAGCCAAGGTTGTCTGATTTTGGGCTGGCCAAGACTTTTGGAAGCAGCTTGGATGAGGAGATTGATCGAAGCTCTCCTGGCTACGTTCCACCCGAGTTTTCTCAACCTGAATATGGCCTCCCAACACCAAAATCTGACGTTTACTGTTTTGGGGTCGTTCTCTTTGAGTTAATTACTGGGAAAAAACCAGTTGGGGATGATTATCCTGAAGAGAAAGAAGGGACTTTGGTAAGTTGGGTAAGAGCATTGGTAAGAAAGAACCTAGCTGCAAGAGCTATTGATCCCAAAATTAGTGATAGAGGAATTGATGATCAAATTGAAGAAGCCCTCAAGATTGGTTATCTCTGCACTGCTGATTTTCCCTCCAAGCGACCTAGCATGCAGCAGATACTGGGACTTCTGAAAGATATTGAACCTACTGCTTAG | 2559 | 0.4189 | MGWGIFGSIVVLTFFFEHLACQRPNTDDFFVSEFLKNMSVSSSSSQAFNFSASVCSWPGISCDANKEHVVELKASCMGLSGPIPDNTIGKLSKLQTLDLSNNKITALPSDFWSLGSLKILNLSFNEISGSLASNFGNFGLLETFDLSSNNFSGEIPEAISSLVSLRILKLDKNKFEQNIPFEILQIQSLVSIDLSQNQLNGTLPEGFGAAFPKLESLNLAGNNLHGHDSDFSGLKSITSINISENSFHGSVLGMFQEQLGVIDLSRNQFEGQISQVKFKYNWSHLVYLDLSENRLGGEIFQYLNEAQNLKHLNLAHNRFASQKFPQLENLSRLEYLNLSKANLHGYIPAEISQLSNLNSLDISLNHLIGGIPFLRSENLQILDLSYNNLSGEIPQPLLQKLPSMEKYNFSYNNLTFCFLGINPNILRTAFYGSSDNCPLAANPNLFKRTNERKGMKLAVALTLSMICLLSGLLFLAFGCRRKTKSWAIKKTSYKEEQNISGPFSFQTDSTTWVADVKQANSVPVVIFEKPLLNITFADLLYSTSNFDRGTLLAEGKFGPVYRGFLPSGIQVAVKVLVVGSTLTDQEAAKELEYLGRIKHPNLVPLTGYCFAGDQRIAIYDHMENGNLQNFLHDLPLGAQRTDDWSTDTLEGDDTNVIHNASSEGLSLSSWQFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKTFGSSLDEEIDRSSPGYVPPEFSQPEYGLPTPKSDVYCFGVVLFELITGKKPVGDDYPEEKEGTLVSWVRALVRKNLAARAIDPKISDRGIDDQIEEALKIGYLCTADFPSKRPSMQQILGLLKDIEPTA | 852 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci9g1100 | 852 | Pfam | Leucine rich repeat | 188 | 246 | IPR001611 | GO:0005515 | |
Prci9g1100 | 852 | Pfam | Leucine rich repeat | 83 | 127 | IPR001611 | GO:0005515 | |
Prci9g1100 | 852 | Gene3D | Ribonuclease Inhibitor | 376 | 445 | IPR032675 | - | |
Prci9g1100 | 852 | Pfam | Leucine Rich repeat | 283 | 298 | IPR001611 | GO:0005515 | |
Prci9g1100 | 852 | Pfam | Leucine Rich repeat | 377 | 392 | IPR001611 | GO:0005515 | |
Prci9g1100 | 852 | Pfam | Protein tyrosine and serine/threonine kinase | 550 | 842 | IPR001245 | GO:0004672|GO:0006468 | |
Prci9g1100 | 852 | Gene3D | Phosphorylase Kinase; domain 1 | 506 | 621 | - | - | |
Prci9g1100 | 852 | ProSiteProfiles | Leucine-rich repeat profile. | 378 | 400 | IPR001611 | GO:0005515 | |
Prci9g1100 | 852 | Gene3D | Transferase(Phosphotransferase) domain 1 | 622 | 852 | - | - | |
Prci9g1100 | 852 | Gene3D | Ribonuclease Inhibitor | 30 | 180 | IPR032675 | - | |
Prci9g1100 | 852 | FunFam | Calmodulin-binding receptor kinase CaMRLK | 257 | 373 | - | - | |
Prci9g1100 | 852 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 282 | 416 | - | - | |
Prci9g1100 | 852 | ProSiteProfiles | Protein kinase domain profile. | 546 | 852 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci9g1100 | 852 | SMART | serkin_6 | 546 | 852 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci9g1100 | 852 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 507 | 621 | - | - | |
Prci9g1100 | 852 | CDD | STKc_IRAK | 552 | 848 | - | - | |
Prci9g1100 | 852 | Gene3D | Ribonuclease Inhibitor | 181 | 279 | IPR032675 | - | |
Prci9g1100 | 852 | Gene3D | Ribonuclease Inhibitor | 280 | 375 | IPR032675 | - | |
Prci9g1100 | 852 | PRINTS | Leucine-rich repeat signature | 94 | 107 | - | - | |
Prci9g1100 | 852 | PRINTS | Leucine-rich repeat signature | 354 | 367 | - | - | |
Prci9g1100 | 852 | SUPERFAMILY | Protein kinase-like (PK-like) | 522 | 845 | IPR011009 | - | |
Prci9g1100 | 852 | SUPERFAMILY | L domain-like | 48 | 424 | - | - | |
Prci9g1100 | 852 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 132 | 228 | - | - | |
Prci9g1100 | 852 | SMART | LRR_typ_2 | 138 | 162 | IPR003591 | - | |
Prci9g1100 | 852 | SMART | LRR_typ_2 | 91 | 113 | IPR003591 | - | |
Prci9g1100 | 852 | SMART | LRR_typ_2 | 186 | 210 | IPR003591 | - | |
Prci9g1100 | 852 | SMART | LRR_typ_2 | 211 | 233 | IPR003591 | - | |
Prci9g1100 | 852 | SMART | LRR_typ_2 | 330 | 354 | IPR003591 | - | |
Prci9g1100 | 852 | SMART | LRR_typ_2 | 114 | 137 | IPR003591 | - | |
Prci9g1100 | 852 | ProSiteProfiles | Leucine-rich repeat profile. | 93 | 114 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci9g1100 | Prci-Chr9 | 25377627 | 25381167 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci9g1100 | 68 | 848 | Receptor kinase-like Gene Family | AT5G07280 | 31.931 | 3.06e-109 | 360 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-2 | Prci9g1100 | PK_Tyr_Ser-Thr | 8.1e-32 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci9g1100 | - | - | gmx:100797738 | 1290.4 |