Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1092 ATGCCGCTTCACAGTCACACATCGGACCCTATAAAAAGGCTTTCCTCCCTCTTCCGAACCATCCCCTATGCGGCCATGCCTGAGCACCACGCTCTTCGCCCGCCTCCAATTCGAACCGCTGATCGTCCTGTAGAACCAGAGGATAAACGAGAGGGTCAGGATAAAAATGAAGGACACCATGACGACGACGACGACGACGGTAAGGAGGAAAAGCACCGGAAACGAGTCTGTAAAGAACCGTCTATCGAGTTACGGAATTGTAAGCCTCCGGATGAGGCCGCAGAGCCGCGAGAATCTACTTCAGAAACCCTAGTCGTGGCCTCTTCGGTTGAATCGGTGGTGTCCAGTCAGAGTGCTGATTTGCAGGCAATCTCTACTACGCGGATTGATGCCAGAGCTGAAAGTAAGGAGCCAAATGGACCTTCAAACAAGGAAATTGTTGTAAGAGAAACATTCCAGGGAGCTCAGAATCAGACAGAAGATCGTTGTGAGGTGACTGTATGTGCAACTCCATTGTCTGCACTATCACCATCTTCTGCTACACAATCTTTATCATCTGTTCCTAGTTCAACTGTACCAGAACAAAGACTATCTCCTCAGAGCGTTAATAATGTGCACGTGCTGGGAGCGGGCAAGAAAAATTCTTCTGGTGGTAAAGCTTTATCTGCTGTTACTGTTGCAAGGACTTCTGCATCTGATGGATACAACTGGCGGAAGTATGGTCAGAAGCAAGTTAAGAGTCCAACTGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGGGTGTTGTGTGAAGAAGATTGAATTTTGCAATCATTCAGGGCTTATGATAGAGATTATTTATAAAGGTCAACACAGCCATGAACCGCTAAGGAAGACTAACACCACTGGGGAAATTAAGTTCATGCCATCTGATGAACCTACTGTAGAAGCCAATCTTCCAGAACAGCCCATTGGAGTGCTCAAAGATGCAGATCCGTCTTCTTCTACGAAAGAACCTCTACAAGATTTACCATGCAATGCTGATAAGAAACGGCAAAATTCATCTGGTCTTAGCGAGAATGGTAAAATTATTTTGAAGGTGGAGCATATTGATGAACCAGAGCTGAAAAGAAGAGTGAAGAATGGTGACTTAACAGACTTGGACTTGCACGTGGAACCTGGAAAGAAATCCAAGTTTGTTGTACATGCAGCAGGGGATGTTGAGATATCAGGTGATGGATATCGATGGCGCAAGTATGGACAGAAAATGGTCAGGGGAAATTCTCATCCCAGAGGGAGATACAATATTTCTTATCTTCTGGAGTCAAAGTTGTGTTGTTGGTGGTGTTGTCCATTACTTTCTGCTATGCTGAGTGGAGCTGCTACCTAG 1371 0.4559 MPLHSHTSDPIKRLSSLFRTIPYAAMPEHHALRPPPIRTADRPVEPEDKREGQDKNEGHHDDDDDDGKEEKHRKRVCKEPSIELRNCKPPDEAAEPRESTSETLVVASSVESVVSSQSADLQAISTTRIDARAESKEPNGPSNKEIVVRETFQGAQNQTEDRCEVTVCATPLSALSPSSATQSLSSVPSSTVPEQRLSPQSVNNVHVLGAGKKNSSGGKALSAVTVARTSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSGCCVKKIEFCNHSGLMIEIIYKGQHSHEPLRKTNTTGEIKFMPSDEPTVEANLPEQPIGVLKDADPSSSTKEPLQDLPCNADKKRQNSSGLSENGKIILKVEHIDEPELKRRVKNGDLTDLDLHVEPGKKSKFVVHAAGDVEISGDGYRWRKYGQKMVRGNSHPRGRYNISYLLESKLCCWWCCPLLSAMLSGAAT 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1092 456 MobiDBLite consensus disorder prediction 328 350 - -
Prci9g1092 456 ProSiteProfiles WRKY domain profile. 226 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1092 456 Gene3D WRKY domain 217 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci9g1092 456 Gene3D WRKY domain 391 440 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci9g1092 456 MobiDBLite consensus disorder prediction 176 199 - -
Prci9g1092 456 MobiDBLite consensus disorder prediction 27 103 - -
Prci9g1092 456 MobiDBLite consensus disorder prediction 318 350 - -
Prci9g1092 456 ProSiteProfiles WRKY domain profile. 399 439 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1092 456 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 180 428 IPR044810 GO:0003700
Prci9g1092 456 MobiDBLite consensus disorder prediction 34 98 - -
Prci9g1092 456 SMART WRKY_cls 404 446 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1092 456 SMART WRKY_cls 231 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1092 456 SUPERFAMILY WRKY DNA-binding domain 399 429 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci9g1092 456 SUPERFAMILY WRKY DNA-binding domain 227 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci9g1092 456 Pfam WRKY DNA -binding domain 406 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1092 456 Pfam WRKY DNA -binding domain 233 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1092 Prci-Chr9 25353793 25357690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1092 166 428 WRKY Transcription Factor Family AT4G30935 46.816 6.05e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci9g1092 WRKY 7.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1092 - - pcin:129320486 793.882