Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1091 ATGCCGCTTCACAGTCACACATCGGACCCTATAAAAAGGCTTTCCTCCCTCTTCCGAACCATCCCCTATGCGGCCATGCCTGAGCACCACGCTCTTCGCCCGCCTCCAATTCGAACCGCTGATCGTCCTGTAGAACCAGAGGATAAACGAGAGGGTCAGGATAAAAATGAAGGACACCATGACGACGACGACGACGACGGTAAGGAGGAAAAGCACCGGAAACGAGTCTGTAAAGAACCGTCTATCGAGTTACGGAATTGTAAGCCTCCGGATGAGGCCGCAGAGCCGCGAGAATCTACTTCAGAAACCCTAGTCGTGGCCTCTTCGGTTGAATCGGTGGTGTCCAGTCAGAGTGCTGATTTGCAGGCAATCTCTACTACGCGGATTGATGCCAGAGCTGAAAGTAAGGAGCCAAATGGACCTTCAAACAAGGAAATTGTTGTAAGAGAAACATTCCAGGGAGCTCAGAATCAGACAGAAGATCGTTGTGAGGTGACTGTATGTGCAACTCCATTGTCTGCACTATCACCATCTTCTGCTACACAATCTTTATCATCTGTTCCTAGTTCAACTGTACCAGAACAAAGACTATCTCCTCAGAGCGTTAATAATGTGCACGTGCTGGGAGCGGGCAAGAAAAATTCTTCTGGTGGTAAAGCTTTATCTGCTGTTACTGTTGCAAGGACTTCTGCATCTGATGGATACAACTGGCGGAAGTATGGTCAGAAGCAAGTTAAGAGTCCAACTGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGGGTGTTGTGTGAAGAAGATTGAATTTTGCAATCATTCAGGGCTTATGATAGAGATTATTTATAAAGGTCAACACAGCCATGAACCGCTAAGGAAGACTAACACCACTGGGGAAATTAAGTTCATGCCATCTGATGAACCTACTGTAGAAGCCAATCTTCCAGAACAGCCCATTGGAGTGCTCAAAGATGCAGATCCGTCTTCTTCTACGAAAGAACCTCTACAAGATTTACCATGCAATGCTGATAAGAAACGGCAAAATTCATCTGGTCTTAGCGAGAATGGTAAAATTATTTTGAAGGTGGAGCATATTGATGAACCAGAGCTGAAAAGAAGAGTGAAGAATGGTGACTTAACAGACTTGGACTTGCACGTGGAACCTGGAAAGAAATCCAAGTTTGTTGTACATGCAGCAGGGGATGTTGAGATATCAGGTGATGGATATCGATGGCGCAAGTATGGACAGAAAATGGTCAGGGGAAATTCTCATCCCAGAAATTACTATAGATGCACATCTGCTGGATGCCCTGTCCGTAAGCAAGTTGAGACTGCAGTAGATGATCCTAATGCTATCATCATTACATATAAAGGAGCACATGACCATGACATGCCTGTGCCCAAGAAAAGACATGGCCCACCAACCGCTGCTCTCATGGCTGCAACTGCCTCTATCTCATCAAACAATTTGCTCCTCAAGAGTACCGATTTGCAGCAAAACCAACAAAGTTCTGCTCAGTTGTCGGTGGATTCAGAAGAAGAATTAACTGAAGATGCCTCGGACCTTGGGGGTGAGAAAGCAATTGAGTCGGCTCGAACTCTTTTAAGCATGGGTGAAGTTAAGCCTTAG 1626 0.4576 MPLHSHTSDPIKRLSSLFRTIPYAAMPEHHALRPPPIRTADRPVEPEDKREGQDKNEGHHDDDDDDGKEEKHRKRVCKEPSIELRNCKPPDEAAEPRESTSETLVVASSVESVVSSQSADLQAISTTRIDARAESKEPNGPSNKEIVVRETFQGAQNQTEDRCEVTVCATPLSALSPSSATQSLSSVPSSTVPEQRLSPQSVNNVHVLGAGKKNSSGGKALSAVTVARTSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSGCCVKKIEFCNHSGLMIEIIYKGQHSHEPLRKTNTTGEIKFMPSDEPTVEANLPEQPIGVLKDADPSSSTKEPLQDLPCNADKKRQNSSGLSENGKIILKVEHIDEPELKRRVKNGDLTDLDLHVEPGKKSKFVVHAAGDVEISGDGYRWRKYGQKMVRGNSHPRNYYRCTSAGCPVRKQVETAVDDPNAIIITYKGAHDHDMPVPKKRHGPPTAALMAATASISSNNLLLKSTDLQQNQQSSAQLSVDSEEELTEDASDLGGEKAIESARTLLSMGEVKP 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1091 541 ProSiteProfiles WRKY domain profile. 226 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1091 541 MobiDBLite consensus disorder prediction 318 351 - -
Prci9g1091 541 ProSiteProfiles WRKY domain profile. 399 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1091 541 SUPERFAMILY WRKY DNA-binding domain 227 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci9g1091 541 Gene3D WRKY domain 389 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci9g1091 541 Gene3D WRKY domain 217 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci9g1091 541 SUPERFAMILY WRKY DNA-binding domain 399 464 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci9g1091 541 MobiDBLite consensus disorder prediction 496 525 - -
Prci9g1091 541 MobiDBLite consensus disorder prediction 176 199 - -
Prci9g1091 541 MobiDBLite consensus disorder prediction 27 103 - -
Prci9g1091 541 MobiDBLite consensus disorder prediction 328 351 - -
Prci9g1091 541 FunFam WRKY transcription factor 390 465 - -
Prci9g1091 541 MobiDBLite consensus disorder prediction 34 98 - -
Prci9g1091 541 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 182 502 IPR044810 GO:0003700
Prci9g1091 541 Pfam WRKY DNA -binding domain 406 461 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1091 541 Pfam WRKY DNA -binding domain 233 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1091 541 SMART WRKY_cls 231 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1091 541 SMART WRKY_cls 404 463 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1091 Prci-Chr9 25353208 25357670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1091 166 540 WRKY Transcription Factor Family AT4G30935 51.181 3.13e-113 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci9g1091 WRKY 2.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1091 - - pcin:129320486 1010.36