Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1085 ATGTGCTTGCCGATAGCAGTTCAGTTCGTGCAGGCATCGCTGTTTCCGCAGTTCACTAAAACTGACAGTTTCTTAGCTCTCCCTCCCTCTCTCTCTCTCTCTCGCTCTCAGAAGGATGATGTGAGCCTTCCGGAGATTCCGCTCGGCGATCTTTCTGGTTCTCTCCTTCTCTTGCTATGCGATTCTACCGCACCTATTGAAAGATCGTGCAATTGTTTTCAAGGTTTTATATATTGGGTATATGTGATCAACTTTTCAAAGATGTTTGACTGTGGTTACAAGGCTCATTACATGGATGGTCAGCGGGAAAAATTTTTGAGGTTGGATGACTTGGACTCTAGACCATCTCCATCTTCTGATGCTGGGCTTGATGAATGTGGATTTAGTATGGTTAAATTAAGCCGTGGTGGTTATACAAGAATTGGAACCACTGGATCTTTTAAAAGAGGAATGAGAATGGGATCTGAAGGACTAAAGTCAATTGGCCGATCACTTGGATTTGGGGTATCTAGGGCAGTCTTCCCAGAAGACCTTAAAGTATCAGAGAAGAAGATATTTGATCCTCAAGACAAATTTTTACTCTTATGGAATAAGCTTTTTGTAATCTCATGCATTTTGGCTGTCTCTATTGATCCATTGTTTTTTTATCTCCCTGTGATCAATGATTCAGTTAACTGTCTTGGTATAGACCGAAAGTTGGCGATCATAGTTAGCACTATAAGAACAATCATTGATGCTTTCTATCTTATACGCATGGCTCTCCAATTTCGCACTGCTTATATAGCTCCATCGTCTCGTGTCTTTGGACGGGGTGAACTTGTTATAGATCCATCACAAATAGCCAAGCGATACATGCAGCGATATTTCATTATTGATTTCCTTTCAGTGCTGCCCTTGCCACAGATTGTAGTTTGGAGGTTTCTTCAGAGGTCAAATGGTTCGGATGTACTGTCAACAAAAGAGGCATTGCTGTTCATTATCTTGCTTCAGTATGTCCCTAGATTTCTCCGAATGGTACCATTGACTTCAGAGCTTAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCATGGGCAGGAGCTGCGTATTATTTGCTATTATACATGCTAGCCAGTCATATAGTTGGGGCTTTTTGGTACTTGTTAGCTGTTGAACGCAATGATTCATGCTGGCAGAAGGCTTGTAGTGAAAATGGGTGTAATAACAATTTCTTGTACTGTGGCAACCAACTCATGGAAGGGTATAGTGCCTGGCAAAATAGGAGCAAAGATATTCTCCATTCACAGTGCTCTGTAGATCCTGAAAACCCACCTTTTGATTATGGAATTTTTACCCAAGCATTTTCATCTGGCATTGTTTCATCTAAGGTATTTATCTCTAAATATTGCTACTGTTTATGGTGGGGGCTCCAGAATTTGAGTACACTTGGCCAAGGACTTCAAACCAGCACCTATGTTGGGGAGGTTGTATTTTCAATAGCGCTAGCCATTTTTGGGCTTATCCTCTTTGCACTCCTGATTGGTAACATGCAGGTTCCAATATTCGAGAGTATGGATGAGAGCTTACTTGATGCAATTTGTGAGAGACTGAAACCATGCTTGTTTACGGAGAATGCTTTCATTGTCCGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATCCGTGGTCGCCTCGAGAGTGTTACGACAGATGGTGGGAGAAGTGGATTTTTCAACCGCACTTTCCTTAAAGAGACAGACTTCTGTGGCGAGGAGCTTTTAACTTGGGCCTTGGATCCCAAATCTGGTTCCAACCTTCCATCTTCTACCAGAACAGTTAAGACACTTGCAGAGGTGGAGGCTTTTGCATTGATTTCTGAAGATTTAAAGTTTGTTGCAAGTCAATTTAGGCGCCTCCATAGCAGGCAGGTTCAACACACCTTCCGCTTTTACTCACAACAATGGAGAACTTGGGCTGCTTGCTTTATTCAAGCAGCCTGGCGTCGTTATTGCAAGCGGAAGATTATGGAGCTTCGTCGAAAAGAAGAATGCGAGGAATCAGGAGGAGTTCGCAACAATGCCGGTGGTGGTTCATACAGTATTCGTGCCACCTTCTTAGCCTCAAGATTTGCAGCCAATGCTCTTCGCGGGGTTCATCGCAGCAGGAATGCCAAGACTTCCAGAGAATTGGTGACCCTACGAAAACCACCAGAGCCTGACTTTACTGCAGATGAATGA 2217 0.4321 MCLPIAVQFVQASLFPQFTKTDSFLALPPSLSLSRSQKDDVSLPEIPLGDLSGSLLLLLCDSTAPIERSCNCFQGFIYWVYVINFSKMFDCGYKAHYMDGQREKFLRLDDLDSRPSPSSDAGLDECGFSMVKLSRGGYTRIGTTGSFKRGMRMGSEGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSIDPLFFYLPVINDSVNCLGIDRKLAIIVSTIRTIIDAFYLIRMALQFRTAYIAPSSRVFGRGELVIDPSQIAKRYMQRYFIIDFLSVLPLPQIVVWRFLQRSNGSDVLSTKEALLFIILLQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAVERNDSCWQKACSENGCNNNFLYCGNQLMEGYSAWQNRSKDILHSQCSVDPENPPFDYGIFTQAFSSGIVSSKVFISKYCYCLWWGLQNLSTLGQGLQTSTYVGEVVFSIALAIFGLILFALLIGNMQVPIFESMDESLLDAICERLKPCLFTENAFIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTFLKETDFCGEELLTWALDPKSGSNLPSSTRTVKTLAEVEAFALISEDLKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKRKIMELRRKEECEESGGVRNNAGGGSYSIRATFLASRFAANALRGVHRSRNAKTSRELVTLRKPPEPDFTADE 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1085 738 SUPERFAMILY cAMP-binding domain-like 510 631 IPR018490 -
Prci9g1085 738 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 177 511 - -
Prci9g1085 738 SMART cnmp_10 513 644 IPR000595 -
Prci9g1085 738 CDD CAP_ED 513 644 IPR000595 -
Prci9g1085 738 Gene3D - 198 512 - -
Prci9g1085 738 ProSiteProfiles cAMP/cGMP binding motif profile. 513 597 IPR000595 -
Prci9g1085 738 Pfam Ion transport protein 195 511 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci9g1085 738 Gene3D Jelly Rolls 513 631 IPR014710 -
Prci9g1085 738 FunFam Cyclic nucleotide-gated ion channel 1 511 629 - -
Prci9g1085 738 SUPERFAMILY Voltage-gated potassium channels 187 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1085 Prci-Chr9 25297403 25310955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1085 510 738 Ion Channels AT2G23980 76.271 4.00e-116 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1085 K05391 - gmx:100820202 679.478