Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1081 ATGGGATTTGAAAGAATAGTGTGTGTTATTATGTTTCTGTGGTTAGTACTGTTATGGCTTTCTTGTTGTGGCTCCTCGTCGTCGTCTCTGGAGGGAGATAGAATAGAGGAGTTGCCGGGGCAGCCGCGAGTGGGGTTCAGTCAGTTCTCCGGTTACGTGACGGTGAACCGCCGGCATGGGCGAGTTTTGTTCTACTGGCTCACTCAGGCCACCTCTTCCCCTCACAGCAAGCCTCTTCTTCTCTGGCTCAACGGAGGGCCTGGTTGTTCATCTATAGCATATGGGGCATCAGAGGAAATTGGTCCATTCCGGATAAGCAAAACTGGTTCTTCTCTATATCTTAACAAAGATGCATGGAATAGAGAAGCAAATGTCCTCTTTCTTGAATCTCCTGCTGGTGTTGGTTTCTCCTACACAAATACAAGCTCGGACCTCAAGACTACTGGGGACGAAAGGACAGCTCAAGATGCTCTGATTTTTCTAATTAGATGGAGGTCAAGGTTTCCACACTATAAATACAGAGAGTTCTACATCGCTGGAGAGAGCTATGCAGGGCATTACATTCCCCAGTTGGCTAAGAAAATCTATGATTATAATAAAGCAAAGCCCCAGATCATTAATCTAAAAGGGTTCATTGTAGGAAATGCTTTGACTGATGACTACTATGATGGGGTTGGAACTATCACATATTGGTGGAGCCATGCTTTGATATCTGATCTCTCATACCAATCAATCCTCAAATACTGCAACTTCACATCAGAAAAAGCTTCCAAAAAATGTGACGATGCAGTGAGTTATGCGGTTAACCATGAATTTGGAAACATTGATACATACAGTATTTATACCCCTCCATGCCGAACATGGCATAACAATACCTTAAGGTATATACGGTTCAAGAGTACAATCTTACATAGGATTTCAGGGTATGATCCATGTACGGAAGATCATGCAGAGAAATATTATAACCGTCCTGAAGTGCAGAAAGCAATGCATGCGAATGTGACAAACATCCCTTACAAATGGACTGCTTGCAGCAAGGTGCTCATAGAAAACTGGATGGATTCTCCAGTTTCTGTATTGCCAATATACAGAGAGTTGATTGCGGCTGGTTTAAGAATATGGGTTTTCAGCGGGGACACAGATTCAGTGGTTCCAGTAACAGCCACTAGGTTTTCCCTCAACCATCTCAACCTCACCGTTAAAACTCGTTGGTATCCATGGTACTCAGGTGGACAGGTGGGCGGATGGACAGAGGTGTATGAAGGGCTAACCTTTGCCACTGTGAGAGAAGCTGGACATGAAGTACCCTTATTTCAGCCCAGGCGAGCACTCACACTCTTCAAATCTTTCTTGGCAGGCAAGGAGCTACCAAGATCTTAA 1380 0.4442 MGFERIVCVIMFLWLVLLWLSCCGSSSSSLEGDRIEELPGQPRVGFSQFSGYVTVNRRHGRVLFYWLTQATSSPHSKPLLLWLNGGPGCSSIAYGASEEIGPFRISKTGSSLYLNKDAWNREANVLFLESPAGVGFSYTNTSSDLKTTGDERTAQDALIFLIRWRSRFPHYKYREFYIAGESYAGHYIPQLAKKIYDYNKAKPQIINLKGFIVGNALTDDYYDGVGTITYWWSHALISDLSYQSILKYCNFTSEKASKKCDDAVSYAVNHEFGNIDTYSIYTPPCRTWHNNTLRYIRFKSTILHRISGYDPCTEDHAEKYYNRPEVQKAMHANVTNIPYKWTACSKVLIENWMDSPVSVLPIYRELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTVKTRWYPWYSGGQVGGWTEVYEGLTFATVREAGHEVPLFQPRRALTLFKSFLAGKELPRS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1081 459 FunFam Carboxypeptidase 308 456 - -
Prci9g1081 459 FunFam Carboxypeptidase 29 287 - -
Prci9g1081 459 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Prci9g1081 459 Gene3D alpha/beta hydrolase 30 287 IPR029058 -
Prci9g1081 459 FunFam Carboxypeptidase 359 453 - -
Prci9g1081 459 SUPERFAMILY alpha/beta-Hydrolases 29 457 IPR029058 -
Prci9g1081 459 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Prci9g1081 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 440 IPR001563 GO:0004185|GO:0006508
Prci9g1081 459 Gene3D - 312 349 - -
Prci9g1081 459 Gene3D - 359 453 - -
Prci9g1081 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Prci9g1081 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Prci9g1081 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Prci9g1081 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Prci9g1081 459 Pfam Serine carboxypeptidase 40 452 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1081 Prci-Chr9 25261689 25269453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1081 317 456 Calmodulin-binding Proteins AT2G22960 27.660 1.27e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1081 K16297 - gmx:100785391 754.592