Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1072 ATGCAGCAAGGTGATCAAACGGTGATTAGCTTGAGGCCTGGTGGTGGTCGTCCCGGCGGCGGTAGCAGGTTCCTTGCTTCTCGATTCGACTCCTCCTCATCGGCTTCCTCTACTTCTCCTGCTTTTGGTTCCTTTGCCTCTGATCTTTCTCTCTCGCGTCCCCATGGCGGTGCTCCTCCTTCTTTTTCCATCAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCATGTTCGATACACTAGGGATCAGCTTTTACAACTGAGGGAGGTTGTTGAGATCCCTGAAGATATTTTAAATATTAAACAAGAAATAGAGGCTGAACTTTTTGGTGAAGATCAAAGCTGGGGCCGTGCGGAAAATTCTGCACAACAATTTCAAAATCGATACTCAGAGCCAGACAACCGTGATTGGCGTGGCCGGTCTGGACAACTTCCTGCTTCTGCAGAAGAGAAGTCATGGGAAAATCTGAGAGAAAATAGAGAGTTTGGAAATCGGTTTGACTCAAGGCAGCAGGATTCCAGTCAATTTAATCGGCAGGATCAACTGAATTCCCAGTTTGCAAGGGCACAGATTTCTTCTAACCTAGGAGGACCTGCTCCAACTTTAGTTAAGGCTGACGTTCCGTGGTCAGCTAGAAGAGGAAACCTATCTGAAAAGGATCGTGTCTTGAAAACTGTTAAAGGAATTCTGAACAAGCTTACTCCTGAGAAATTTGACGTCCTGAAGGGTCAATTGATTGATTCTGGAATAACATCTGCTGACATCTTGAAGGGAGTCATTTCACTTATATTTGATAAGGCTGTACTAGAACCAACATTTTGCCCCATGTATGCTCTTCTTTGTTCAGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGATGAGCCTGGTGGGAAAGAAGTCACATTTAAGCGAGTGCTCTTGAATAACTGCCAGGAGGCTTTTGAAGGTGCTGATAAACTGAGGGAGGAAGTGAGGCAGATGACTGCTCCTGAACAGGAGATGGAGCGTAGGGATAAGGAAAGACTGGTCAAACTTCGTACTCTTGGAAACATTCGCTTAATTGGGGAGCTGTTGAAGCAGAAGATGGTTCCTGAGAAGATTGTCCATCACATTGTTCAGGCACTTTTAGGACCTCCTGATAGCAAGTCCTGTCCAGTTGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAATACTATTGGTAAACAACTTGATGAAAGCCAAAAATCACGGCGTATTAACGACATGTACTTTAGCAGATTGAAAGAACTGAGCTCAAACCCCCAACTTGTATCACGGTTGAGGTTCATGATTCGTGATGTTCTGGATTTACGTGCTAATAACTGGGTTCCAAGACGTGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATTCAGAAGCTGAAAAGAATCTTGGATTGCGGCCAGGTGCGACTGCAAGCATTAGAAATAACCGTGCTGCAGCTTCTGGTGTTCAAGGAAATATAAGCCCTGGTGGATTTCCAATTGCTCGACCTGGTACAGGAGGTATGATGCCTGGAATGCCAGGGACCAGGAAGGTGCCTGGGATGCCTGGAATTGATAATGACAACTGGGAAATGCCTAGGACACGATCAACGCCGAGAGGAGACATGCCAGGTATGCAAGCTGCAGGACGTGGCCAGTCTCCCTTACTTTCAAAGTCATCAGCCCTGAACTCAAAGCTATTACCTCAAGGTAGTGGTGGTCTCATAAGTGGAAGAAGCAGCGCCCTAGTGCATGGTGGGGGTGCTCCTCCTGCTCGTCCATCAAACTTTGTTTCTGGTGCTGAGCCTGCATCTCAAATCCCTACACCTGCGAAAGCAGTCCCTAGTGGGTCCTTTGAGAAGCCACAGGCTCCTGCTCCAAAATTAAATTCTGATGATCTTCGCCGCAAAACTGTCTCTCTTCTGGAAGAATATTTCAGTGTTCGTCTTTTGGATGAGGCATTGCAGTGTGTGGAAGAACTAAAGGCTCCATCTTACCACCCCGAGTTTGTCAAGGAGGCCATTTCCCTTGCACTGGATAAAAGTCCACCCTGTGTTGATATTGTGGCCAATCTTCTTGAGTATCTTTTTATTCAGAAGATTCTTACTGCTAGAGATATAGGGACTGGCTGTTTGTTGTTTGGTTCCATGCTAGACGACATCGGCATAGATTTACCTAAAGCACCAAATAATTTTGGTGAGATAATTGGGAAGCTCATTTTGGCTGGGGGATTGGATTTTAAGGTAGTGAGAGAGATCCTTAAGAAGGTGGAAGATGACTTGTTCCAGAAAGCAATATTTGATGCTGCAATAAGGATCATCAGTTCTGCATCCGGGCAAGCTCTTTTAGATTCACAAGCGTCCGATATTGAGGCTTGCCGCGGCGTGCTCAAGTGA 2406 0.458 MQQGDQTVISLRPGGGRPGGGSRFLASRFDSSSSASSTSPAFGSFASDLSLSRPHGGAPPSFSIKAGDSRFEGREHVRYTRDQLLQLREVVEIPEDILNIKQEIEAELFGEDQSWGRAENSAQQFQNRYSEPDNRDWRGRSGQLPASAEEKSWENLRENREFGNRFDSRQQDSSQFNRQDQLNSQFARAQISSNLGGPAPTLVKADVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKEVTFKRVLLNNCQEAFEGADKLREEVRQMTAPEQEMERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQALLGPPDSKSCPVEENVEAICQFFNTIGKQLDESQKSRRINDMYFSRLKELSSNPQLVSRLRFMIRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNNRAAASGVQGNISPGGFPIARPGTGGMMPGMPGTRKVPGMPGIDNDNWEMPRTRSTPRGDMPGMQAAGRGQSPLLSKSSALNSKLLPQGSGGLISGRSSALVHGGGAPPARPSNFVSGAEPASQIPTPAKAVPSGSFEKPQAPAPKLNSDDLRRKTVSLLEEYFSVRLLDEALQCVEELKAPSYHPEFVKEAISLALDKSPPCVDIVANLLEYLFIQKILTARDIGTGCLLFGSMLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVREILKKVEDDLFQKAIFDAAIRIISSASGQALLDSQASDIEACRGVLK 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1072 801 MobiDBLite consensus disorder prediction 537 559 - -
Prci9g1072 801 MobiDBLite consensus disorder prediction 119 153 - -
Prci9g1072 801 FunFam Eukaryotic translation initiation factor isoform 4G-2 630 791 - -
Prci9g1072 801 Gene3D - 629 794 - -
Prci9g1072 801 MobiDBLite consensus disorder prediction 585 634 - -
Prci9g1072 801 SMART if4_15 223 449 IPR003890 GO:0003723|GO:0005515
Prci9g1072 801 Pfam MIF4G domain 223 449 IPR003890 GO:0003723|GO:0005515
Prci9g1072 801 SUPERFAMILY ARM repeat 216 452 IPR016024 -
Prci9g1072 801 SMART ma3_7 637 749 IPR003891 -
Prci9g1072 801 Pfam MA3 domain 637 749 IPR003891 -
Prci9g1072 801 ProSiteProfiles MI domain profile. 636 758 IPR003891 -
Prci9g1072 801 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 52 785 IPR045208 GO:0003743
Prci9g1072 801 FunFam Eukaryotic translation initiation factor isoform 4G-2 214 450 - -
Prci9g1072 801 SUPERFAMILY ARM repeat 630 780 IPR016024 -
Prci9g1072 801 Gene3D - 214 450 - -
Prci9g1072 801 MobiDBLite consensus disorder prediction 1 67 - -
Prci9g1072 801 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1072 Prci-Chr9 25226056 25232390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1072 1 799 Eukaryotic Initiation Factors Gene Family AT5G57870 65.672 0.0 1002
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1072 K03260 - qsa:O6P43_022212 1266.14